KEGG   Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365: LBUL_0691
Entry
LBUL_0691         CDS       T00419                                 
Name
(GenBank) ATP-dependent DNA helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lbu  Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Pathway
lbu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LBUL_0691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lbu03400]
    LBUL_0691
Enzymes [BR:lbu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     LBUL_0691
DNA repair and recombination proteins [BR:lbu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LBUL_0691
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 UvrD-helicase UvrD_C AAA_29 DEAD HHH_5 AAA_23 HHH nSTAND3 Herpes_Helicase FH2 PIF1 RecR_HhH IMS_HHH DUF496 SMC_N Mg_chelatase AAA_12 T2SSE Zeta_toxin NTPase_1 T3SS_needle_E DUF5832 cobW
Other DBs
NCBI-ProteinID: ABJ58317
Position
641235..643625
AA seq 796 aa
MTEFSGEVKSVIYENAQNMYKILLVAVSQPLAGYDDDEIKVTGTFGDLELGQEYNFTGDL
VTHPKYGLQFQATGCQPALPKETGGVVKYLSSEKFPGIGPKTAEKIVDQLGSGGLKSLQA
DPTLIAKLDLSQKQKDSLLSGLAQMDSFDDLGMTLASYGIPRKVAGRLYQKYHDQTLKKL
QADPYLPLGEVTGYSFKQADHLGIGFGIALDSLERADGSILAVLLQALTMEGETYLELEE
LLPAAKELTNINFDRLAEAVNDLQDKKKVVVEEGRASLLAPFQVESEIVTDLEDLLAKGK
EADYREKDLDQAIKRAERKLGISYDPEQKQAIKNAVTSPVSILTGGPGSGKTTIIDGILL
VLKDLADMDEEEAEEAILLAAPTGRAAKRMEEVTGYPAKTIHRLLGLGIDNSEEMELNDL
EGEILIVDEMSMVDIYLFEKLLSAISNVHHLVFVGDKDQLPSVGAGKVFADLIEADFIPT
CQLQVVHRQKDDSTIIPLAHAVNEGANPAVLLQKTASYSFIPCRPHAVPSAVEQITQAAL
KSGFAADDIQVLGAMYRGDGGINSLNDTLQRVINPEKGNDKAVEAHGENFRLHDRVLQLQ
NDPERGIYNGEIGKVVAVDPEMLEDEDDEVKLLVNFDGNEVAYTQADLNNLTRAYAITIH
KSQGSEFPLVILCLTMQNYIMLKRNLLYTAITRASQKLVMVGEEQAFAQAMRVKGNERRT
NLVWLLKDRFKPEEQSKQESSDSTENTLDKEEKVEDYILTGARISRAEISPMVGMEGLVQ
GCKNLVEIVRTKGPGA
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgaccgagtttagcggtgaagtaaagagcgttatttatgaaaatgcgcaaaacatgtac
aagatcttgctggtcgccgtaagtcagcctctggccggctatgacgatgatgaaatcaag
gtgacggggaccttcggggacctggagcttggccaggaatacaactttaccggtgacttg
gtcacccaccccaagtacggcttgcagtttcaagcgactggctgccagccggccctgccg
aaagagactggcggggtggtcaagtacctgtcttctgagaagttccctggcatcgggccc
aagacggcggaaaagatcgttgaccagctgggcagcgggggcttaaagagcttgcaggct
gatccaaccttgatcgccaagctggatctttcccaaaagcaaaaagacagcctcttgtcc
ggcctggctcagatggattcctttgacgacctgggtatgactttggccagttacgggatt
ccccgcaaggtggccggccgcctttaccagaagtaccatgatcagaccttgaaaaagctg
caggccgatccctacctgcctttaggcgaagtgaccggctattccttcaagcaggccgac
cacttgggaattggctttggaattgcccttgacagtctggagcgggctgatggcagtatc
ctggcggttttgctccaggccttgaccatggagggggaaacctacctggaactggaagaa
cttttgccagccgccaaggaactgacaaatataaattttgaccgcctggcagaagcagtt
aacgacctgcaggacaagaagaaggtcgtcgtggaagaaggccgggccagcctgctggcc
ccatttcaagtggaaagcgagatcgtgaccgacctggaagaccttttagccaagggcaag
gaagcggactaccgggaaaaagacttggaccaggccatcaagcgggccgaaaggaagctg
gggatcagctatgaccctgagcaaaagcaggccatcaaaaacgcggtaaccagtccggtc
tccatcctgactgggggacccgggagcgggaagacgaccatcattgacgggatcttgctg
gtcttaaaggacctggccgacatggacgaagaagaagctgaagaagcgattctcctggcc
gcgccaaccggccgggcagccaagcggatggaggaagtcaccggctatccggccaagacc
atccaccgcctcttgggcctggggatcgacaacagcgaggaaatggagctgaatgatttg
gaaggggagatcttgatcgtcgacgaaatgtccatggtcgacatctacctctttgaaaag
ctgctcagcgccatcagcaatgttcaccacctggtctttgtcggtgacaaggaccaattg
ccatccgtcggggcggggaaggttttcgctgacttaatcgaggcggacttcattccgacc
tgccagttgcaggtggtccaccggcaaaaggacgattcaacgatcattcccctggcccac
gcggtcaacgaaggagccaacccggctgttctcttgcaaaagacggccagctactccttt
attccttgccggccccatgccgtgcctagcgccgtcgagcagatcacccaggcagcctta
aagagtggctttgcggctgacgacatccaggttctgggggccatgtaccgaggcgacggt
gggatcaacagtctgaatgacaccctccagcgggtgatcaacccggaaaagggcaatgat
aaagcagttgaggcccatggtgagaactttcgcctgcatgaccgggtcctgcagctgcaa
aatgacccggagcgggggatctacaacggcgagattggaaaggtcgtggccgttgacccg
gaaatgctggaagacgaggatgacgaagtcaagcttttggtcaattttgacggcaatgaa
gtggcttacacgcaggcggacttgaataacctgacccgggcctatgccatcaccatccac
aagtcccaggggtcagaatttcctttggtcattctctgcttaaccatgcagaactatatc
atgctcaagcgcaatcttttgtatacggccatcaccagggcttcccagaagctggtcatg
gtcggagaagagcaggcttttgcccaggccatgcgggtcaagggcaatgagcggcggacc
aacctggtctggctcttgaaggaccgctttaagccagaagaacaaagtaagcaagagagt
agtgactctacagagaatactctggataaagaagaaaaagtcgaagactacatcttgacc
ggggcccggatcagccgggcggagatttctcccatggttggcatggagggcctggttcag
ggatgcaagaatttggtggaaatcgtccggaccaagggaccaggagcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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