KEGG   Leadbetterella byssophila: Lbys_2266
Entry
Lbys_2266         CDS       T01350                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
lby  Leadbetterella byssophila
Pathway
lby03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lby00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Lbys_2266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lby03019]
    Lbys_2266
Enzymes [BR:lby01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Lbys_2266
Messenger RNA biogenesis [BR:lby03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Lbys_2266
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Flavi_DEAD AAA_19 PhoH AAA_22
Other DBs
NCBI-ProteinID: ADQ17943
UniProt: E4RVP4
Position
complement(2468485..2469771)
AA seq 428 aa
MNKTFKDLDLNKQLIMAVEELGYTEPTEIQEKAIPIIQAGHDVLGIAQTGTGKTAAYLLP
VLMKVKYAQGQNMRALVLAPTRELVMQIHEAAVGLAKYTDLRMVALYGGLGPKTQMENLK
KGVDIIIATPGRFMDLYRMGEIPVKSLQYLILDEADKMMDMGFMPQIRQILEVIPRKRKN
LLFSATFQPRVERLSEEFLEAPYKIEVTPSATAASTVEQHIYRLPNFKTKINLLGYLFEN
TEIPRAIIFCRTKAVADNVYKFLERKVIGSGKIRVLHANKGQNTRINAINDFKSGEIQVL
VSTDVAARGIDVSGVSHVINFDVPLVYEDYVHRIGRTGRAKSEGIALTFVLKHEEFHIER
IEKLIRNPIPELPIPEKVKIEETSFEENQEMLKAIDTQRKKLDPTFQGAFHEKKAKNARK
PLVKKKKK
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaataagacttttaaagatctggacctcaataaacagctgattatggctgtggaggaa
ttggggtacacagagcctacagagatacaagaaaaagccattcctatcatacaggcaggg
catgatgtgctaggtatagcgcagacgggtacgggtaaaaccgcagcctatctattaccg
gtactcatgaaggtgaaatatgctcagggacagaacatgagggctttagttttggctcct
accagagagttggtcatgcagattcacgaggcggcagttgggctggctaaatacacggat
ctcagaatggtggctttgtatggaggactggggccaaagactcagatggagaacctgaaa
aaaggagtggatattatcatcgctactccgggaaggtttatggatttgtaccgaatgggc
gagatcccggtgaagagtctgcaatacctgatcctggatgaggcggataaaatgatggat
atgggcttcatgccacagatccgacaaattttagaggttattccaaggaagagaaagaat
ctacttttctctgctacctttcagcctagggtagaaaggctatccgaagagtttttggaa
gctccttataaaatagaggtaactccctccgctacggctgcttcgaccgtggagcagcat
atctatagactgccaaattttaaaacgaagattaatctattggggtatttgtttgagaat
acagaaatcccaagagccattatcttctgtagaacgaaggccgtagcagataatgtgtat
aagttcttagagagaaaggtaataggctccggaaagattcgcgtcttacatgcaaataag
gggcaaaacacccgaatcaatgccattaacgacttcaagagtggggaaatccaggtgttg
gtgtctacggatgtggctgccagaggcattgatgtcagtggggtcagtcatgtgattaac
tttgacgtgccattggtttatgaagactatgtgcaccggataggaagaaccggtagggcc
aaatcagaagggatagccttgacctttgtgctaaaacatgaagagtttcatattgaaagg
atagaaaagttgattagaaatcccatccctgaactacctatccctgaaaaagtgaagatc
gaggagacctcttttgaagaaaatcaagagatgttaaaggctatagatactcaaaggaag
aaattagatcctactttccagggcgcattccatgagaaaaaggctaaaaatgcaagaaaa
cctttggtgaaaaagaaaaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system