KEGG T01350: Lbys

Leadbetterella byssophila: Lbys_3538

Entry

Lbys_3538 CDS T01350

Definition

d-alanine--d-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

lby Leadbetterella byssophila

Pathway

lby00473	D-Alanine metabolism
lby00550	Peptidoglycan biosynthesis
lby01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:lby00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:lby00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp GARS_A

Other DBs

NCBI-GI:

312132199

NCBI-GeneID:

9957424

UniProt:

E4RZ68

Position

complement(3985536..3987293)

AA seq 585 aa
MDKKIKVGIFFGGQSREREISFLGGRTAYEHLDKRFFEPVLIFVDSLGNFIHVEPSILNE
ADIRSFYPSKNQNNGYKVYIESLGPLKVSQLYKLIYKIGSQVKIEELKSYMDFAFVVMHG
PSAEDGSIQGLLEWLNIPYLGPGILGSAVGINKPFQNKLMAYATGQEKKYLTISKREWNT
SDRSKLFSSVIAKLGFPFVVKAPHQGSSIGVAIVRKRSLEEFSKAMSQCFFETFITKKEW
DKLSPRRKKNVMEKMSNLDEGIGFPVVLDGEQIYHPATLLKKLDEYLTQHEVAQLNSVNG
EDYVLIEEFISGQEFSCGVIQDDEGRVLPLPPAEVYGETATFDFKAKYKSTVSKKRIPVK
TSDANLEKIHEDVLKAFEATGMSVICRIDGFITEDDVVVLHDPNTLPGMSPSSFIFKQMA
EVGFNITNSLTYFIRQSLIERIRSGKNQFEVQQLLNHLSTQIKNAPARKRLAVLFGENEK
EFILAKKVYNELCGSEEYEPVPVCAALNGSRYIIPLNLMYKPDINEFGTAIATPKHPFIQ
KNIELVKQVRAFYAGEVDFSVRKVSEQDYNQIFKHTYDCLTGELH

NT seq 1758 nt +upstreamnt +downstreamnt
atggacaaaaaaattaaagtaggaattttttttggtggacagtcgagagaaagagaaatt
tctttcctcggtggacgtaccgcttatgagcatctggacaaacgcttttttgagccggtt
cttatctttgtagatagtttaggcaactttatacacgtagaaccttccatcttaaacgaa
gctgatattcgtagcttctacccttccaagaatcagaataatggatacaaagtttatata
gaatctctgggaccattaaaagtctctcagttgtataaactcatctataaaataggctca
caagtcaaaatagaagaattaaagtcctatatggactttgcatttgtagtaatgcatggc
ccatctgctgaagatggcagcatccagggtctattagagtggctgaatattccttacctg
ggccctggcatattaggttcagctgtaggcataaacaagcctttccaaaacaaactgatg
gcctatgctacgggccaggaaaagaaatatcttaccattagcaaaagagaatggaatact
agtgatagatctaaactattctccagtgtaattgcaaaacttggatttccatttgtagtt
aaagctccgcatcaaggatcttctataggagtagctatagtgcgaaaaagaagtctggaa
gaattctccaaagccatgtcccaatgcttctttgaaacctttataacaaagaaagaatgg
gataaactttctcctcgcagaaagaaaaacgtcatggagaagatgagcaatctggatgag
ggcataggttttccagtagtcttagatggagagcaaatctaccatccagctacacttcta
aagaagttagacgagtacttgactcagcatgaagtagcgcagctaaacagcgtaaacgga
gaagactatgtcttgattgaagagtttatcagcggtcaggaattctcttgcggagttata
caagatgacgaaggtagagttctacctttacctcccgctgaggtatatggagaaacggcc
acttttgactttaaagccaaatacaagagcactgtcagcaaaaagcgaataccggttaaa
acctctgatgctaacctagagaagatacatgaagatgtattaaaagcattcgaagccaca
ggtatgagcgtgatttgcagaattgatggtttcattacagaagacgatgtcgtggttcta
catgacccgaataccttaccgggaatgtctccatcttccttcatctttaaacaaatggcg
gaagtaggatttaatatcaccaactctctgacatacttcattcgtcaatctctaattgaa
agaataagaagcgggaaaaatcagtttgaagtacagcaacttctaaaccaccttagtacc
caaatcaaaaacgctcccgctcgtaagcgccttgccgtactatttggagaaaacgaaaag
gaattcatactggcgaagaaagtatacaatgaactttgcggaagcgaggaatacgaacct
gtaccggtatgtgctgcattaaacggatccagatatattattcctctgaatctaatgtac
aagccagatatcaatgaatttggtacggctatagccacgcctaagcaccctttcattcag
aaaaacattgaactggtaaaacaagtgagagcattctatgctggggaagtggacttctcc
gtaagaaaggtttcagaacaggattataaccaaattttcaaacatacatacgactgtcta
accggagaactgcattga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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