KEGG   Leishmania braziliensis: LBRM_27_1140
Entry
LBRM_27_1140      CDS       T01113                                 
Name
(RefSeq) putative vesicular transport protein (CDC48 homologue)
  KO
K14571  ribosome biogenesis ATPase
Organism
lbz  Leishmania braziliensis
Pathway
lbz03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lbz00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LBRM_27_1140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lbz03009]
    LBRM_27_1140
Ribosome biogenesis [BR:lbz03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    LBRM_27_1140
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_22 AAA_33 AAA_14 RNA_helicase AAA_2 TIP49 AAA_28 IstB_IS21 nSTAND3 Zeta_toxin AAA_18 Mg_chelatase AAA_3 AAA_17 TsaE NACHT ABC_tran AAA_11 AAA_24 ATPase_2 AAA_7 Vps4_C NB-ARC Sigma54_activat Parvo_NS1 NTPase_1 Rad17 bpMoxR Sigma54_activ_2
Other DBs
NCBI-GeneID: 5416734
NCBI-ProteinID: XP_001565873
UniProt: A4HFM9 A0A3P3Z9V1
Position
27:complement(439107..441107)
AA seq 666 aa
MSDMSDRLKGKLKHMARQTPNGYRKQRPGSGPRHFADDNYPNHGKRPRDEEEGRQQDSKS
SSSRAPSGKGVGKNASDGGEGEVLGVIPKTTLEDMGGLAKELPVIKELIQLPIRMPHLFN
YLGADPPCGVLLHGPPGVGKTRLVHAIAGSLQVPLFFVSAPEIVSGISGDSEAKLRNLFM
DAIAASPSIVFIDEIDTIAGRREDAQRGMESRIVGQLLTCMDQVSQAWRQHRKVVCVMGA
TNRPEALDTALRRAGRFDREIALGIPSIDERQSILNIICSKINLSDDVDFFELANMTPGY
VGADLQLLVKEACVLAIRRKYKELDERGAVEGVKTEELSGFCVTFGELKEATKRVQPSAM
REGFTTIPNVSWDDVGALEDVREELVTSILQPIRAPKLHHRFGLDHPVGVLLYGPPGCGK
TLVAKAIANQSGANFISIKGPELLNKFVGESERSVRMVFARGRASAPCVLFFDELDALAP
RRGSDRANPSSERVVNQLLTELDGVEGRKDVYVIGATNRPDMIDPAMLRPGRLDKLLYVP
LPSAAQRGSILQTHARKYPVDAEVNLERLALDERLAGFSGADLAALMREASLTALKGVYR
SHTKDELEGLERDITGKSADTAALPTITADNFEASLAKIKPSVSAADRANYESMSLELRN
SAKSVG
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgtcggacatgagtgaccgcctcaaggggaagctgaagcacatggctcggcagactccc
aacggatatcgcaagcagcgacccggtagcggcccacggcactttgctgatgacaactac
ccgaaccacgggaagcgtccgcgtgatgaagaggagggaaggcagcaggacagcaagtcc
agcagcagccgggctcccagtggcaagggggtaggaaagaatgccagcgacggtggagag
ggcgaggtgctcggtgtcattccaaaaactaccctcgaagatatgggtggcttggccaag
gagctgccggtaattaaggagctcattcagctgcctatccgcatgccgcatctcttcaac
taccttggtgcagacccgccatgcggcgtcttgttgcacggtcccccaggcgttggcaag
acgaggctcgtccacgctatcgctggctcgctgcaggtgcccctcttcttcgtctcggcg
ccagagattgtctccggcatcagcggcgacagcgaggcaaaactgaggaacttgttcatg
gacgccatagcagcgtcgccgagcattgttttcatcgacgagatcgataccattgcaggc
cgtcgcgaagatgcccagcgcggtatggagagccgcatcgttggacagctgcttacgtgc
atggatcaggtgtcgcaggcgtggcggcagcacaggaaggtggtgtgcgtgatgggggcg
actaaccgccctgaagcgctcgacacggcgctgcgccgcgctggccggtttgatcgcgaa
atcgccctcggcatcccttcgatcgacgagcggcagagcatcctcaatatcatctgctca
aagattaatttgtcggacgacgtcgatttcttcgagctcgccaacatgacccccggctac
gtcggcgcagacttgcagcttctcgtcaaggaggcgtgcgtcctcgctatccgccgcaag
tacaaggagctggacgagcgcggtgctgtggagggtgtaaagacggaggagctctccggg
ttctgcgttacgtttggtgagctgaaggaggcaacgaagcgggtgcagccgtcggcgatg
cgggagggcttcacgaccatcccgaacgtttcctgggacgacgttggcgccctcgaagac
gtgcgagaggagctggtgaccagtatattgcagcctatccgggcgccgaagctgcaccac
cgctttggtctcgatcaccctgtcggtgtgctgctctacggtccaccaggctgcggcaag
acactggttgcaaaggcaatcgcgaaccaatctggagcaaacttcatctcgatcaagggg
ccagagctgctcaacaagttcgttggggagagtgagcgcagcgtacgcatggtcttcgcg
cgtgggcgggcaagcgctccatgtgttctctttttcgatgagttggatgccctggcaccg
cgccgtgggtcggacagggcaaacccaagcagcgagcgcgtggtaaaccaacttctgaca
gagctggacggcgtggaagggcgaaaggatgtctacgtgattggagccacgaaccgcccc
gatatgattgaccctgccatgctgcgtccaggtcgcctggacaagctgttatacgtgccg
ttgccgtcggctgcgcagcgcggatcgattctgcagacccacgcccgcaagtatccagtg
gatgctgaggtgaacctggaaaggctggcgcttgacgagcggctcgccggcttcagcggt
gccgacttggcagccctaatgcgcgaggcatcgctgaccgcgctaaaaggcgtgtacagg
tcgcacacgaaagacgagctggaagggctggagcgcgacatcaccggcaagagcgccgac
acggcggctttgcctaccatcacggcagacaacttcgaggctagcttggcaaagatcaaa
ccatcggtctctgcggcggatcgggcaaattatgagagcatgagtcttgagttacgcaac
agcgccaagagtgtcgggtaa

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