KEGG   Lactobacillus casei ATCC 334: LSEI_1708Help
Entry
LSEI_1708         CDS       T00407                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lca  Lactobacillus casei ATCC 334
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:lca00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    LSEI_1708
Enzymes [BR:lca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LSEI_1708
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LSEI_1708
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1700886..1701734)
Genome map
AA seq 282 aa AA seqDB search
MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVSSEITTIDRRGKYL
LMRLSNGETIISHLRMEGRYYVVKDANTPFDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
KTGQEDQVTALAKLGPEPTPSTFDEADFAQRLKRHHKPIKSVLLDQTVVAGVGNIYADEV
LWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTYVDAEGNRGSFQNALH
VYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq 849 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaat
aaagtcattaccgccatcaacactaactgggagaaaatcctgatcaatgggttggcgact
tttcaaaaggaaattgtcagcagtgagatcacgaccattgatcggcgcggcaagtatctt
ttgatgcgcctcagcaatggtgaaacgatcatcagccatctgcgtatggaagggcgttac
tatgttgtcaaagatgcaaacacaccttttgacaagcacgatcacgttacgttcactttt
caggatggcagtcagttgcgctatcgggatctgcgaaagttcgggcggatgcggctgatc
aaaaccgggcaggaggatcaggtcacagcacttgctaaacttgggccggaaccaacccca
agcacctttgacgaagcggactttgcccagcgtttgaaacgtcatcataaaccgattaag
tcggttttactcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggta
ctttggttaagtcggctcaatccgctgcagccagctgataccttgaaatctaaagaaatc
aaaacactgcatgacgcgattatccaagaattaaatgcagccattgcggcaggcggcacc
agcgcgcatacgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcac
gtctatgatcgggaaggtaccccgtgcgatcgctgcggcacgacgattgtcaaaattaag
gttggtcagcgcggaacccattactgcccacactgtcagccattacatcaaaggaggcgg
ccagcgtga

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