KEGG   Liberibacter crescens: B488_06570
Entry
B488_06570        CDS       T02395                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lcc  Liberibacter crescens
Pathway
lcc03420  Nucleotide excision repair
lcc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lcc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B488_06570
   03430 Mismatch repair
    B488_06570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcc03400]
    B488_06570
Enzymes [BR:lcc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B488_06570
DNA repair and recombination proteins [BR:lcc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B488_06570
   MMR (mismatch excision repair)
    Other MMR factors
     B488_06570
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor Viral_helicase1 AAA_12 AAA_11 DEAD DUF3553 CarD_TRCF_RID DUF294_C
Other DBs
NCBI-ProteinID: AGA64649
UniProt: L0ESZ5
Position
complement(725466..727670)
AA seq 734 aa
MIVEELNPQQTKAVTTIDGPLLVLAGAGTGKTKVLTTRIARIICEQKAYPSQILAMTFTN
KAAHEMKERVSTIIGDQVYSIPWLGTFHFIGAKFLRRHAELAGLSSNFTILDSDDILRLI
KQLLQEKNIDDKRWNPRAFANLIDQCKNEGLNPEDTLNTEMQMFADHKGSELYACYQQRL
QKLNACDFGGLLLNPINIFRKNDDILKEYHHKFRYIMVDEYQDTNVAQYMLLRLLTQKTG
ENSRQKVNICCVGDDDQSIYAWRGAKVENILRFAKDFPDATVINLEQNYRSTSPILKTAI
HLISHNENRLHKTLFTKQKIDEEQKVQVHVARDSTEEVQAIINEIECLRYKEHPLSRMAI
LVRASFQMREFEEHFLKHQIRYNIIGSQRFYDRLEIRDSIAYFRLVYQANDNLAFERIVN
TPKRGIGNTTLSQLRHYAQLHNLSMLNAAKDMIETEELPKQRKAPLANLLENINRWSELL
TEMPHTKVAEIILEESGYMAMWQNDKSPEAQSRQDNLKELLRAMESFDSIGEFLENVSLV
ANLGQNRENTDAVQMMTLHSAKGLEFDTVFLPGWEEGLFPHQRSIDEEGLFGLEEERRLA
YVGITRARKQCHIWLAARRRIHSGFWQPTLPSQFLKELPSDEIEFLDGDINYQYTAHYSK
NTWIDSYKESSDPLFKEDNTPLSHKKYAFTIGDKVFHIKFGYGNIIAIEDQNLTIDFDHS
GQKCILDSFIKPIK
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgatagtagaagaattaaatccccagcaaacaaaagcagtcacaacaattgacggccct
ctcctcgtgcttgccggcgctggcacaggaaaaacaaaagtactaacaacacgtatagcg
cgtattatttgtgaacaaaaagcttatccctctcaaatcctggccatgacctttaccaat
aaagcagctcacgaaatgaaagaacgcgtttcaaccattattggagatcaagtatatagc
ataccttggcttggaactttccattttattggggctaaatttttacgtcgccatgcagaa
ttagcgggtttatcatccaactttaccattcttgattccgatgacattctacgactcatc
aagcagttgctgcaggaaaaaaatattgatgataaacgctggaatcctcgggcatttgct
aacctgattgatcaatgcaaaaatgaaggcctcaatccggaagataccctgaataccgaa
atgcaaatgtttgctgaccataaaggaagcgaattgtatgcgtgctatcagcagcgttta
cagaaactcaatgcttgtgattttggcggattacttctcaatccaatcaatatttttcga
aaaaatgatgatattcttaaagagtatcatcataaatttcgctatatcatggttgacgag
tatcaagatacaaatgtcgcccaatatatgcttttgcgattattaactcaaaaaacagga
gaaaattctagacaaaaagtcaatatatgctgtgtaggcgacgatgatcaatctatctat
gcatggcgtggcgcaaaagttgaaaatattctccgttttgcaaaagattttcctgatgca
acagtcatcaatcttgaacaaaattaccgttctacttctcctattttaaaaacggcaata
cacctgatctctcataatgagaatcgactgcataaaaccctttttacaaaacaaaaaata
gatgaagaacaaaaagttcaagtccatgttgccagagactcaacagaagaagtacaagca
attataaatgaaattgaatgtctgcgctataaggagcatcccttgagtcgtatggcaatc
ctcgtgcgtgcttcttttcaaatgcgtgaattcgaagaacattttttgaaacatcagatc
cgttacaatattataggcagtcagcgtttttacgaccgcttggaaatacgcgacagtata
gcctattttcgtttggtctatcaggccaatgacaatctggcttttgaacgtatcgtcaat
actccaaaacgcggtattggcaatactactttaagtcaattgcgtcattacgctcaatta
cataatctctccatgttgaatgctgccaaagacatgatcgaaactgaagagttaccaaag
caacgtaaggctcctctagccaatctcctcgaaaatatcaatcgttggagtgaattgctc
actgagatgccgcatacaaaagttgctgaaatcattcttgaagaaagtggctatatggcg
atgtggcaaaatgataaatctccagaagcacaaagtcgtcaagacaatcttaaggagctt
ctacgcgctatggaaagcttcgattcaataggagaatttcttgaaaatgtatcgcttgta
gctaatttaggtcaaaatagagaaaataccgatgctgtacaaatgatgaccttgcattca
gctaaaggtctggaatttgatactgtcttcttgccgggttgggaagaaggactctttcct
catcaacgttcgattgatgaggaaggtctctttggactagaagaagaacgtcgtctcgca
tatgttggcattacaagagccaggaaacaatgccatatctggctcgcagccagaagacgt
atccattctggattttggcaacctaccctaccttcacaattcctgaaagaactgccatca
gatgaaatagaatttctggatggtgatatcaattatcaatatacagcgcattattctaaa
aatacatggattgattcctataaagaaagttcagatcctctatttaaagaagataatact
cctctttcacataaaaaatatgcatttacaattggagataaagtttttcatataaaattt
ggttatggaaatatcatcgctattgaagatcaaaatttaaccattgattttgatcattct
gggcaaaaatgtattcttgatagtttcataaagcccataaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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