KEGG   Lacticaseibacillus paracasei LC2W: LC2W_1141
Entry
LC2W_1141         CDS       T01956                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lce  Lacticaseibacillus paracasei LC2W
Pathway
lce03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LC2W_1141
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lce03019]
    LC2W_1141
Messenger RNA biogenesis [BR:lce03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LC2W_1141
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B RMMBL Ish1 Lactamase_B_3 BRK
Other DBs
NCBI-ProteinID: AEA53475
UniProt: A0A8B5RBX2
Position
complement(1110021..1111268)
AA seq 415 aa
MTTIRFLNGLNTIGGNIVEFATKTSRVIMDFGVAADLSNETVSSAIDNGKLPHVPELFFD
QPDVYTHEAIFISHLHIDHMGALQYLKKPIPIYLSEPSYKLYQLLIKLGIEKPVANLHPL
AYEQPITIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAERVHAWAKRF
NQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPTLVVINPYIR
NYERLASFQASAHTAGRQLVWEPDDAAVLTTMSDQKPDAILGQTISLTDIARDPQHYVLQ
NSFDHLERLTDMPITTYIHSNGEPLGDYDPRFAQLKDWLEAHHIPLQFMNASGHASREDL
ITLAKEVNPRTIVPWHSFHPEREAEALDTQTNAAVVLPERDLYYDFDELSEDEQS
NT seq 1248 nt   +upstreamnt  +downstreamnt
gtgacaacaattcgctttttaaatgggttaaacaccatcggcggcaacatcgtcgaattc
gcaactaaaaccagccgcgttatcatggacttcggcgtggctgctgatctcagcaacgaa
acagtcagctctgccatcgataatggtaaattgccgcatgtgccggaactattttttgat
caaccagacgtttacacacatgaggccatctttatctcacatctgcacattgaccacatg
ggtgcattgcaatatttaaagaaaccgattccgatttatctttcggaaccatcctataag
ctctatcaactgttaatcaaactaggcatcgaaaagccagttgcaaatctgcatccgctt
gcctatgaacagcccataaccattggtgacctcaccgtaacaggcttccacagtgatcac
gacgagccgggcgtcatggcgctcctagtcgatgacggctcacgacgctatgcccattcc
ggtgatgtccggttaaatggcccgcatgctgaacgggttcatgcctgggccaagcgattt
aaccaagaaaagctaagcttgtttatgttggaaggcaccagcttctcttttgacacagct
gcccctgttgaagatcaggatcaccccagcatcccattgaccgaaatgagcctgcagaag
caatttcagacagtgctggcggagagtccgacgcttgtcgtcatcaatccttacatccgc
aattacgagcgtctggcgagttttcaggccagtgcacacactgccggccgtcaattggtg
tgggaacctgatgacgcggctgtgctgaccaccatgtccgatcaaaaacccgatgctatt
cttggtcaaacaatcagtctgacggacattgcccgtgatccccaacactatgtcctgcaa
aatagttttgaccatctggaacgactgactgacatgcccatcacgacctatatccacagt
aacggcgagccactaggcgattacgacccgcggtttgcgcaactcaaagactggctagaa
gcgcatcacatccccttgcagttcatgaatgcctcgggtcatgctagccgtgaggattta
attactttggcgaaagaagtcaatcctcgaaccattgtgccatggcatagcttccatccg
gaacgcgaagccgaagccttggatacccaaacaaatgctgctgtggtgcttcctgaaaga
gatttgtactatgactttgatgagttaagtgaagatgaacaatcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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