KEGG   Lacticaseibacillus paracasei LC2W: LC2W_3128
Entry
LC2W_3128         CDS       T01956                                 
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lce  Lacticaseibacillus paracasei LC2W
Brite
KEGG Orthology (KO) [BR:lce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lce03016]
    LC2W_3128 (gidA)
   03036 Chromosome and associated proteins [BR:lce03036]
    LC2W_3128 (gidA)
Transfer RNA biogenesis [BR:lce03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LC2W_3128 (gidA)
 Prokaryotic type
    LC2W_3128 (gidA)
Chromosome and associated proteins [BR:lce03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LC2W_3128 (gidA)
SSDB
Motif
Pfam: GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 Pyr_redox_2 AlaDh_PNT_C Pyr_redox DAO ThiF HI0933_like Pyr_redox_3
Other DBs
NCBI-ProteinID: AEA55453
UniProt: A0A291IZ21
Position
complement(3031953..3033854)
AA seq 633 aa
MPDVKKFEAGTYDVIVVGAGHAGCEAALAAARMGQKTLLLTISLEMLAFMPCNPSLGGPA
KGIVVREIDALGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIENT
PNLDLRQGLATEVLVENGQAVGIVAATGAMYRAKSVVLTAGTSSRGKIIIGELMYSSGPN
NSLPSIKLSENLEQLGFKLRRFKTGTPPRVNGNTIDFDKTEEQPGDKTPNHFSFTTPDSV
YLKDQLSCWMTYTNATTHQIIRDNLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQ
LFLEPEGRDTSEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLK
ATLETKVVDNLFTAGQMNGTSGYEEAAGQGIMAGINAALRAQGKGPFTLKRSDAYIGVMI
DDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDERYAEFLAKRQAIE
TELNRLNTTRLKPKDVNPWLEAHHYAPLKDGVLASDFLKRPEIDYQTMAQFLPDNPTLDH
RVIEQVEIQIKYAGYIAKEEASVAKLKRLEGKKIPLRINYAAINGLATEARQKLVKIQPE
TIAQASRISGVNPADVAILSVYIEQGRISKVAQ
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgcctgatgtcaaaaaatttgaagccggtacctatgatgtcatcgttgttggtgctggt
cacgctggttgtgaggccgctttggcagccgcgcggatgggccaaaagacgttactattg
acgatcagcttggaaatgctggcgtttatgccgtgtaatccaagtctgggcggcccagcc
aagggaatcgtggtgcgtgaaattgatgcactcggtggtgaaatgggcaagaatattgat
cgaacatatattcagatgcggatgcttaacaccggcaagggcccagccgttcgtgcatta
cgggcacaggctgataaagcagcctatcaccgcagcatgaaacacgtgattgaaaacacg
ccaaatctggatctgcgtcaaggcctcgctactgaggtgctcgtcgaaaatggccaagct
gtcggtatcgtggcggcaactggcgcaatgtatcgggccaagagtgttgttttgaccgca
ggcaccagttctcgtggcaagattatcatcggtgagttgatgtacagttctggtcctaat
aacagcctgccaagtatcaagctgtcagaaaatcttgaacagctcggcttcaaattgcgg
cgatttaaaaccgggaccccgccgcgagtcaatggcaacaccatcgactttgataaaacc
gaggaacagcctggcgataagactccgaatcattttagcttcacgacgccagattcagtt
tatttgaaggatcagcttagttgctggatgacttacactaatgcaacgacccatcaaatt
attcgcgataatttggatcgggcgccaatgttttccggtgtgatcaaaggggttggcccg
cgctattgcccatcaattgaggataagatcgttcgttttgctgataagccgcggcatcaa
ctgttcttagagccagaaggtcgcgatacctccgaatactatgtcggtgatttttcgact
tctatgccagaagaaattcaactgaaaatgctgcatagtgtggctgggttggaacatgcc
gaactcatgcgtgccgggtatgcaattgagtacgatgtgatcgagccatggcaactgaag
gccacgttagaaaccaaagtcgttgataatcttttcactgccggccagatgaatggcacc
agcggctatgaagaagcagctggccaaggcattatggctggcatcaatgcggcgttgcgt
gcccaaggcaaagggccgttcacgctcaagcgttccgatgcctatattggtgtgatgatt
gatgatttggtgactaagggcacgaatgaaccttatcgcctgttgaccagccgtgctgaa
tatcgacttttgttgcgccatgacaatgccgatctgcggctgacaccaatgggccatgag
cttggtttaattagcgatgagcgctatgctgaatttttggcaaagcgtcaggccattgaa
accgaacttaaccggctgaatacgacccggttgaagcctaaagacgtgaatccatggcta
gaggcccatcattatgcgccacttaaggatggcgtcttggccagtgacttcctgaagcgg
ccggaaatcgactatcagacgatggcgcaattcttgccagataatccgactttggatcat
cgtgtcattgagcaggttgagattcaaattaagtatgctggctatattgcaaaggaagaa
gccagtgtcgccaaactgaaacgcctagaaggcaaaaagattccgctacgtattaactac
gcggccatcaatggtttggcaactgaagcacgtcagaagttggttaaaatccagccagaa
accattgcgcaggcgagtcgtatcagcggcgtcaatcctgccgatgtggcgattttgtca
gtgtacattgagcagggacgcattagtaaagtggcccaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (29)   

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