KEGG   Lates calcarifer (barramundi perch): 108876599
Entry
108876599         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: mitochondrial antiviral-signaling protein
  KO
K12648  mitochondrial antiviral-signaling protein
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04621  NOD-like receptor signaling pathway
lcf04622  RIG-I-like receptor signaling pathway
lcf04623  Cytosolic DNA-sensing pathway
lcf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    108876599
   04622 RIG-I-like receptor signaling pathway
    108876599
   04623 Cytosolic DNA-sensing pathway
    108876599
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108876599
SSDB
Motif
Pfam: CARD_2
Other DBs
NCBI-GeneID: 108876599
NCBI-ProteinID: XP_018521739
UniProt: A0A4W6DR23
Position
LG19:complement(20857641..20865169)
AA seq 577 aa
MSFASDKLYNGYLRRRMPIIVTKVKVKEVMPYLPCLTIHDRENIEAKRETYGNYDGMVLL
LDCLKRRENWPEQFIEALEACEQKTIAAEIRAEYDALRGVNNSNPSSPSTTVTRAHVHPA
PSGSPVSVPESGGNTQAAVTPPAQASAPPQPAVQASPPLETPVHPQAQSSPAREPEAVPP
PEPVPEPPQPTQAEVAPPPSTPPPSPETPRTPASTPPPSPPQREIIAHQEPEENTESDII
GVIPDQVSPGKRQVPVNSVATPPLSRPGEQGEIETPAAPATEVRPPQSTAPTQVNSDWID
GTSFPTLTPEKPPVQDTFPPADKIPPVVLECEETSEPPATQVVERSPQPETAAAAAPLPA
GAAGMDASVFEDTLCLSKPGQLVSMQPQNHDSPTIPAHNPPSQPYSGDSQRLEISEAAPE
SISSVCSAVTSTAVNTASGLLCQENGLSLDHNEPEENQYDSPNLSLETQVNVVQFSEEPS
ILNLDGQTSAPQAQNINGEAAREITPPPPSSSTTAADTASGLDAPSEPAPPVITSEVKTL
PGSEETASRFLPANTKYILTAAGVGACALLMAWKFKN
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtcatttgccagtgacaaactctacaatgggtatctgcggcgcagaatgccgatcatt
gtaaccaaagttaaagtgaaagaagtaatgccctatctgccctgcttgaccattcacgac
agggagaatatagaggcgaaaagagagacttatgggaactatgacggcatggtgctgctt
ctggactgtctgaagaggagagaaaactggcctgagcagttcatcgaagcacttgaagca
tgtgagcagaaaactatagcagcagagatcagagctgaatacgatgctctgagaggagtt
aacaattccaaccccagctccccttcaacaactgtcaccagggcacatgtccacccagca
ccatctggcagtcctgtgtccgttccagagagcggtggaaacactcaggctgctgtcact
ccgccagctcaagcatcagctcctccacagccggctgttcaggcctcacctcctctggaa
acccctgtgcatccacaagcccagagctcaccagcccgtgaaccagaggccgttccccca
cctgagccggtccccgagcctccgcagccgactcaggccgaagtggcgccgcctccatca
acgcctcctccttcccctgagaccccacgcactccagccagcacgccaccgccatcgcca
ccacagagggagattattgctcaccaggagccagaggaaaacaccgaatcagacattatc
ggtgtgattcctgatcaggtgagcccaggaaagaggcaggttcctgtcaactctgtggcg
actcctccgctgtctcgtcctggtgaacagggtgaaatagaaacaccagcggcaccagca
acagaggtcaggccaccacagagtactgctcctactcaggtgaactcagattggatagac
ggaacctctttccccacactgaccccagagaagcctccagtccaggataccttccctcct
gcagacaaaatacctcctgttgtcctggaatgtgaggagacatctgaacctcctgctaca
caggttgttgaacgcagcccgcagccagaaacagcagctgcagccgcccctttacctgct
ggagctgctgggatggacgcctctgtctttgaggacactttgtgtctgagcaagcctggc
cagctcgtcagcatgcaaccgcagaatcacgacagtcctactatccctgcacacaaccca
ccatcacagccctactcaggcgatagccagcgcctggaaataagtgaagctgctccggag
tcgatttcctctgtgtgctctgctgtcacctccaccgctgttaatacagcctctggactg
ctgtgccaggagaacggcctttctcttgaccataacgaacctgaggagaaccagtatgac
tctcccaatctgagtttggaaactcaggtgaatgtggtgcagttttcagaggagccgtcc
atcctcaacctagatggtcagacatcagcaccacaagctcaaaacatcaacggcgaagca
gccagggagatcactcctcccccaccatcctcctccaccaccgctgctgatacagcatcg
ggtttggacgccccctctgaacctgcaccacctgttattacatcagaggtgaaaacactg
ccaggttcagaggaaacagcatctcgcttcctgccagctaatacaaaatacattctgact
gctgcaggagtgggtgcctgtgctctactgatggcgtggaagtttaagaattaa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

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