KEGG   Lates calcarifer (barramundi perch): 108877499
Entry
108877499         CDS       T04895                                 
Symbol
cdc42
Name
(RefSeq) cell division control protein 42 homolog isoform X1
  KO
K04393  cell division control protein 42
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04010  MAPK signaling pathway
lcf04144  Endocytosis
lcf04370  VEGF signaling pathway
lcf04510  Focal adhesion
lcf04520  Adherens junction
lcf04530  Tight junction
lcf04810  Regulation of actin cytoskeleton
lcf04912  GnRH signaling pathway
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108877499 (cdc42)
   04370 VEGF signaling pathway
    108877499 (cdc42)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108877499 (cdc42)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108877499 (cdc42)
   04520 Adherens junction
    108877499 (cdc42)
   04530 Tight junction
    108877499 (cdc42)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108877499 (cdc42)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    108877499 (cdc42)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108877499 (cdc42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108877499 (cdc42)
   03036 Chromosome and associated proteins [BR:lcf03036]
    108877499 (cdc42)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108877499 (cdc42)
   04031 GTP-binding proteins [BR:lcf04031]
    108877499 (cdc42)
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    108877499 (cdc42)
 Endocytosis
  Lipid raft mediated endocytosis
   GRAF1-dependent endocytosis
    108877499 (cdc42)
  Macropinocytosis
   Ras GTPases
    108877499 (cdc42)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    108877499 (cdc42)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   108877499 (cdc42)
  Exosomal proteins of breast milk
   108877499 (cdc42)
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    108877499 (cdc42)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 108877499
NCBI-ProteinID: XP_018523086
UniProt: A0A4W6FG31
Position
LG12:complement(10546670..10559775)
AA seq 191 aa
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR
DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP
EPKKKRKCVLL
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcagaccatcaagtgtgttgtagttggagacggtgctgtgggtaaaacctgcctgctc
atctcttacaccacaaacaagtttccctctgaatatgtacctacggtgtttgataactat
gctgtaactgtaatgattggaggcgagccctacactctgggcttgtttgatacagcaggt
caggaagactacgacaggttacgacctctgagttaccctcagacagatgtcttccttgtc
tgtttctccgtcgtgtccccctcttcctttgaaaatgttaaagaaaagtgggttcccgag
atcacccatcactgtccaaagacacccttcctcctagttgggactcagattgacttgcgg
gatgacccctccactatagagaagctggccaagaacaagcaaaaacccatcactccggag
acagctgagaagttggccagagacctcaaggctgtgaaatatgtggagtgctcagccctc
acacagaaaggcctaaagaatgtgtttgatgaggcgatattggctgcattggagccccca
gagcccaagaagaaacgcaaatgtgtgctgctatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (85)   

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