KEGG   Lates calcarifer (barramundi perch): 108879076
Entry
108879076         CDS       T04895                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
  KO
K11840  ubiquitin carboxyl-terminal hydrolase 9/24 [EC:3.4.19.12]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcf01002]
    108879076
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108879076
Enzymes [BR:lcf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108879076
Peptidases and inhibitors [BR:lcf01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108879076
Ubiquitin system [BR:lcf04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108879076
SSDB
Motif
Pfam: UCH UCH_1 DUF3517 UBA
Other DBs
NCBI-GeneID: 108879076
NCBI-ProteinID: XP_018525738
Position
LG17:complement(6836822..6868233)
AA seq 2625 aa
METEEEQHITTLLCMGFPDPDVIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGLGSSGDGENSGRTGTGGFDPPPAYHDVVDSERSNDENGNCSGGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFMDRCMPEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELVAERVKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKACQRN
WAEVFGEEANMFAVSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQTKLNTEEIEIACVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVAVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSLDELSKIWRIQAGQSSTVIENI
HTIIAAAAVKFSFDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLE
VLWELAHLPTLPTSLVQQALEEHLGILSDAYAVKETVKRSYIIKCIEDIKKTHTQEDNKG
SDTQSSFLTGTWGKKKANSLAKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAVTASGNNGLSGSTLVDGRYTYQEYLDSHLRFLAFF
LQEASLYLVWNRAKELWECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRYRGGFGSTKLVIIERLLLLAERYVITIEDMYSVPRTILPHG
ASFNGHPVTLHITYESTKDTFTLETHSNETIGSIRWKISEHLSCPVDNVQIFANDSVLTM
NRDQKLLSQLGFSDEQSLTVKSSGTGTPSGSSESSASASSSSSSAVFNSAYALEQEKSLP
GVVMALVCNVFEMLYQLANLDESRITIRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQ
KTLFTLGQGTGSRSPSMASKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMP
TSDDEMAKTSSKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLL
VGQSMPAALDDDVIRDGEALSSRPFRNAGRTGRQLSLCGTPEKSSYRQMSLSERSSIRVE
EIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSPQPIRETHSSLLPQGVRT
RVSSTGSNCSSSSEGESMPTALHAGICVRQQSVSIKDAIIAREALSLLVTCLQLRCQQLC
SFYNLPSVNDFIIDILLGSPSGEIRRVACDQLYTLSQSDTSAFLEVQKPNLFLLSVILTA
QLPLWSPTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTTSEMEALKVSAATMLEDEISWLD
NFEPSWSSEMETSQADNILLAGHLRLIKTLLSLCGNEKEHLGPSLIQQLLDDFLFRASRI
IINSSNPTPSPALSHDFHPKCSTASSRLAAYEVLVMLADSSLSNLRLITKELLSMHHQSD
PSLCKEFDYLPPVESRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAFLSIEDDTDQP
EESVFYQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDE
HLKKMGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVR
GEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFP
WVLNMEPYTVSGMARQDCSGEGGEGRGDGTSGGSPRKKVTISENYELVGVVVHSGQAHAG
HYYSFIKDRRARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRY
WNAYMLFYQKISDQNSPVLPKKSRVSIMRQEAEDLTLSAPSSPDVSPQSSPRPPRANNDR
LTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDYFNFTLSLASVNAT
KLKHPDYQPMAKESLQLAVHFLFHTYLHTKKKLRVDTEEWMATVEVLLSKSSEACQWMVQ
YLVGPEGREITRVCLLECSVREVRLVVASILEKTLESALHFGDPGLDSLTDALLSLLDKD
VPENVKNCAQYFSLFSNFAQRGCGPCQLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQA
REFLHLHSTLALITLHSDLSPQRTQAPGGFKLRVSNVPSSTPLLPLHVDILTSLFTPEGQ
PYLLEVMFAMRELSGPLSLLIEMVTYCSYCNEPFSQGVLQLLKTQLETAPPHELKNIFQM
LQELLVVEDPLQSQRLKYAFESEKGLLALMHQSNNMDSRRCYQCVKFLVTLAQKCPPAKD
YFKDLSGHWSWAVQWLQKKMTEHYWTPQSNVSNETSTNKTFQRTISAQDTLAYATALLNE
KEQSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq 7878 nt   +upstreamnt  +downstreamnt
atggagaccgaagaggagcagcacataacgacgctcctctgcatgggtttcccagacccc
gacgtgatacggaaggctctccgcctggcaaagaacgacatcaacgaggcagtggcgctc
ctgacgaacgaaagccccggactcgggtatggatacgagccgatggagagtgggcctgct
cccggcttgggttcgagcggagacggggaaaatagcgggcgtactgggacgggagggttt
gaccccccgcccgcataccacgatgtggtggatagcgagaggagcaacgatgagaatggg
aactgctctgggggaagcatggagttccccaccaccaacctgtatgagctggagagtcga
gtctttactgatcactggtcgataccttacaagagagaggagtctctgggcaagtgcctc
attgcgtccacctgcctcgccagacacggccttgctgacgctgatgagaactgcaagcgg
tttatggatcgctgcatgccggaggcctttaaaaagttgctgacgagtagcgcagtacac
aaatggggcacagagattcacgagggcatctacaacatgctcatgttgctggtggaactg
gttgcagagagggtcaagcaagaccctgtacctgtaaacctaatgggagtcctgactatg
gccttcaaccctgataatgagtaccattttaagaatcgaatgaaggcctgtcaaaggaac
tgggctgaagtttttggagaagaggccaacatgtttgctgtgtcccccagcaacacctat
cagaaagagcctcatggttggctggttgatttggtgaatcgatttggggagttgggagga
ttcactgccatccagaccaagctcaacactgaggaaattgagattgcatgtgtttcagct
ctggtccagcctcttggagtttgtgcagaatacctcaactccagcctcgtccagcccatg
cttgatccggtcatccacaagatgatcacatatgtacagaacctggaggaaaaggatctt
aaagacaagcgtctggtaagcatcccagacctgctgtcggccatcaagctgttgtgtatg
aggttccagagggaactggttgctgtggtggacgatctgcggctagacacactgctgcgt
atgctcaaaaccccccatttctccaccaagatgaactctctcaaagaggtgacgaagtta
atagaagagagcacggtgtctaagacagtgaaaaacgccattgacacggataaattactt
gactggcttgtagagaattcagtcctgtcaatagcactggagggtaacattgatcaagct
cagtactgtgagaggattaagggaatcattgagctgctggggagtaagctgtcactggat
gaactctctaagatctggagaatacaggcaggccaatcatcaactgtgatagaaaacatt
catacaatcattgctgctgctgctgtgaagttcagttttgatcagctcacccacctcttt
gtgctcatacaaaagagctgggaggttgagagtgaccgtgtgaggcagaaactgctcagt
ctgatcgggaggataggcagagaagctcgttctgaaactacaactggaaaggtgctggag
gtgctgtgggagttggctcatctccccaccctgcctaccagtctagttcagcaggcgttg
gaggagcacctggggatcctgagcgatgcctacgctgtcaaggagacggtgaaacgcagt
tacatcattaaatgtattgaggacatcaagaagactcacactcaggaggacaataaaggc
agcgacactcaaagctcatttcttactggcacttggggcaagaagaaagccaactctttg
gccaaagcttcacagcaaagcagtcctcaggcagtttgggttgttcccgctctccgtcag
ctgcacgagatcacccgttctttcatcaagcagacctatcaaaaacaagacaagagcatc
atccaggatctgaagaagaactttgagatcgtcaaactgatcacaggatcccttgtgtgc
tgccatcgactcgctgtgactgcatcgggaaataatggactctcaggctcaaccctggtg
gatggacgatacacctaccaggagtatctggacagccacctgcgcttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagggccaaagagctctgggagtgtctg
gtgtcagggccggatgtctgtgaacttgaccgtgagatgtgttttgagtggttcaccaaa
ggacaacatgacctggagagtgatgttcagcagcagctcttcaaggagaaaatcctaaaa
cttgagccctatgagatcactatgaatggttttaatctgtttaagaccttctttgagaat
gttaatctgtgtgatcatcgcctgaaacgccaaggaactcagctgtgtgtggagcgcctt
gacctggcagggatggattttatctggcgcatcgccatggaaacccctgatgaagagata
gccaatgaagcaatccagctcattatcacatacagctacaccaacctcaatcccaagatg
aagaaggattctgtatctttgcacaagaagttcattgctgattgttacaagagactagag
gcagcaagttcggccctgggtgggcctactttgacacatgctgttactagggcaaccaag
atgctgacggctaccgcaatgccgactgtggccacatctgtacaatcaccatccaggtac
agaggggggtttggatccactaagctggtaataattgaaagactgctgctactggctgaa
cgctacgtcattactatagaggacatgtactcagttcctcgcactattctacctcatggg
gcctcattcaatggacaccctgtcactcttcacatcacctatgagtcaaccaaagacact
ttcaccttagagacccacagtaatgagacaataggaagtatccggtggaagatatctgag
cacttgagctgtccagtggataatgtccagatctttgccaatgatagcgtgttgaccatg
aatcgagaccagaagctgctgtcccagcttggctttagtgatgagcagagcctaactgtg
aagagctcaggcactggcactccttctggcagctcagagtcctcagcctccgcctctagc
agttccagctccgccgtcttcaactctgcctatgccttggagcaggagaagtccctgcct
ggtgtggtcatggctttggtgtgtaatgtgtttgagatgctttaccaactggctaacctt
gatgaatctaggatcaccatccgtgtgaggaagctgctgctgctgatcccaacagaccca
gaagtgcaggatgctctcgacaactttgttcccaaagaatccagtgtctggagccaccag
aagacgctgttcaccctcggccagggcacaggctctcggtctccatctatggcctccaag
cagcagcaccagcccagtgctgcatccatcttggagtccctattcagatcctcagcacct
ggcatgtccaccttcagagtgctatacaatcttgaggtgttgagttcaaagctcatgccc
acatctgatgatgagatggccaaaaccagcagcaagtccttctgtgagaacttcctcaaa
gcaggaggtctcagtttggtggtgaatgttatgcagagggattccatcccatcagaggtg
gactacgagaccagacaaggagtctattcaatctgtcttcagttggccaggttccttctg
gttggtcagagcatgcctgcagcactagatgatgatgtcatcagagatggtgaggcgctg
tcctcccgtccatttcgcaatgctggaaggaccgggcggcagctgtctctctgtggaact
ccagagaagtcgtcctacagacagatgtccttgtctgagcgctcatccataagagtggaa
gagatcataccggctgctcgtgtagctattcagaccatggaggtgggagacttcacctcc
actgtggcctgtttcatgcgtctgacctgggcggctgcagcaggccgattggatctggtt
ggcagtccacagccaatcagagagacccacagttcacttctgccacagggagtccgcacc
agagtcagcagtacaggaagtaactgcagctctagcagtgagggcgagagcatgccaaca
gcgttgcatgcagggatatgtgtcagacagcagagtgtctccatcaaagatgccatcatc
gcccgtgaggccctgtcactgctggttacctgtctgcagttacgctgtcagcagctatgt
tctttttacaatcttccctctgtcaatgatttcattattgatattctgctgggatctccc
agcggagagattcgccgtgtggcttgtgatcagctgtatactctgagccagtctgacact
tcagccttccttgaagtccagaaacccaacttgttcctcctctcagtcattctcaccgct
cagctgccactatggagtcccacatctgttatgagaggagtcaaccagaggttgctgtcc
cagtgcactgagtactttgacctaagatgtcagcttctggatgacctaaccacgtcagag
atggaggcgttaaaagtgagtgcagcgaccatgctggaggacgagatctcttggctcgac
aattttgagcccagctggagctctgagatggagaccagccaggcggataacatcctcctg
gctggacatctccgactcatcaagaccttactctcactctgtggcaacgagaaggaacat
ctcggtccatctctgatccagcagttgttggatgacttcctgtttcgagcctcacgcatc
atcatcaacagttccaaccccacaccttccccggccctcagccatgacttccatcccaag
tgcagcacagccagcagcagactggcagcctacgaggtgcttgtgatgctggcagacagc
tctctctcaaacctccgactcatcaccaaggagttactgtccatgcatcaccagtctgat
ccttccctctgcaaggagtttgattatctacccccagtagagagccggtcagtctcaggt
tttgttgggctgaagaatggaggagccacatgttacatgaatgctgtgttccagcagctc
tacatgcagcctggcctgccagaggctttcctgtccattgaggatgacacagaccagcca
gaggagagcgtcttctaccaggtccagtctctatttggacatctgatggagagcaaactg
cagtactatgtacctgagaatttctggaagatcttcaagatgtggaacaaggagttgtat
gtaagagaacagcaggatgcttatgagttcttcacaagccttgtcgaccagcttgacgaa
catctcaagaaaatgggtcgagaacagatcttcaaaaacacatttcagggaatcttctct
gaccagaagatttgtaaagactgtcctcacaggtatgagcgtgaagaaacattcatggca
ttgaaccttggagtgacttcttgtcaaagtctggagatctcattagaccagtttgtcaga
ggagaggtgctggagggcagcaacgcctactactgtgagaaatgcaaggagaagagaacc
acagtgaagaggacgtgtatcaaatccctgcccagtgttctctgtattcatctcatgcgc
ttcggcttcgactgggaaagcggacgctccatcaaatatgatgaacagattaggttcccc
tgggtgctgaacatggagccctacactgtctctggaatggctcgtcaagactgtagcgga
gagggcggcgaggggcgaggggatgggacatcaggagggtcacccaggaagaaggtcaca
atttctgagaactacgaacttgtgggagttgttgtccacagtggtcaggcacatgccgga
cactactactccttcattaaagacaggcgtgcccggggacgttggtacaagttcaatgac
aatgtggtggaggagtttgatatgaatgatgagactctggagtacgagtgctttggggga
gagtatcgccccaaagtctatgaccagtccaacccatacccagatgtgcggaggagatac
tggaacgcctacatgttgttctatcagaagatcagcgatcagaactcacctgtcctgccc
aagaaaagtagagtcagcattatgagacaggaagctgaggaccttactctgtcagccccg
tcctctcctgatgtttccccacagtcctctccccgccccccacgtgccaacaacgaccgt
ctcaccctcctcacccgccttgtccgcaagggagagaagaaagggctgtttgtagagaag
atgcctgccagcatctaccagatggtgcgagatgagaatctcaagttcatgaggaacagg
gacgtctacaacagtgactacttcaacttcaccctctctctagcctccgtcaatgcaact
aaactgaagcatccagactaccagcctatggccaaagagagtctccaactggctgttcac
tttctcttccacacctacctacacaccaaaaagaaactccgggtggacacagaggagtgg
atggctacagtagaggttttgctgtctaaaagcagtgaggcatgtcagtggatggtgcag
tacttggtcggaccagagggacgggagatcaccagagtttgtctgttggagtgcagcgtg
agggaggtgaggctggtggttgcgtccatcctcgaaaagaccctggagagcgcgctacac
tttggtgacccaggattggacagtttgaccgacgccctgctctccttactggacaaagat
gttcctgagaatgtgaaaaactgtgcacagtacttcagcctcttcagtaactttgctcag
aggggttgcggtccctgtcagttgttgttgaaacactcagcttatcgccggatgctcatc
ttcctgttgggacccaataggcagaataatcagaatcggcggtggagtccagctcaggct
cgggagttccttcacctccacagcactctggccctcatcactctccactctgacctcagc
ccacagcggacgcaagctccaggaggatttaagctgcgtgtgagtaacgtcccatcctct
accccactcctccccctccatgtggatatcctgacctcactcttcaccccagagggacag
ccttaccttctagaggtgatgtttgccatgcgtgagctgtcaggcccgctatctctcctg
atagagatggtgacctactgctcgtactgtaatgagcccttctcccagggtgtgctgcag
ctactcaagacccagctggagacggctccacctcatgaactgaagaacatttttcagatg
ctgcaggagctattagttgtggaagaccctctgcaatcccagagactcaagtatgctttt
gagtcagagaaaggcctgttggccttgatgcaccagagcaacaacatggacagcagacgc
tgctaccagtgtgtgaagttcctggtcacattagcccagaagtgtcctccagccaaggat
tactttaaggacttgtctggtcactggagctgggcagtacagtggctacaaaaaaagatg
acagagcattactggactccacaaagcaacgtctccaatgagacatccaccaacaaaacc
ttccagcgcactatctctgcacaggataccttggcctacgccacagcgttgttaaacgag
aaggagcagtctggcagcagtaacggctctgacggcagtccagcaaatgaaaacgccgac
cgcagcctccgacaggggtccgagtctcccatgatgctgggcgattcgaagagtgatcta
gaagacgttgacccctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (52)   

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