KEGG   Lates calcarifer (barramundi perch): 108879576
Entry
108879576         CDS       T04895                                 
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00260  Glycine, serine and threonine metabolism
lcf00630  Glyoxylate and dicarboxylate metabolism
lcf00785  Lipoic acid metabolism
lcf01100  Metabolic pathways
lcf01200  Carbon metabolism
Module
lcf_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    108879576
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    108879576
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    108879576
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     108879576
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase Aminotran_5 DegT_DnrJ_EryC1
Other DBs
NCBI-GeneID: 108879576
NCBI-ProteinID: XP_018526439
UniProt: A0A4W6EIU9
Position
LG13:2550438..2568720
AA seq 1030 aa
MQSCAKSWGIFLAKSVSPSAPCRHLSVKSRVVWKLQCRIRNSGASLTAAARGLRTSAAVS
SRQIERILPRHDDFAERHIGPGEREKREMLDALGLESIDQLIENTVPASIRMQWSMKMDD
PVCENEILESLQKIASMNKVWRSYIGMGYYNCSVPPPIQRNLLENAGWVTQYTPYQPEVS
QGRLESLLNYQTMICDITGMPVANASLLDEGTAAAEAMQLCHRQNKRRTFYIDPRCHPQT
IAVVQTRANYIGVKTVLKLPHEMDFSGKDVSGVLFQYPDTDGRVEDFTALVDRAHKGGAL
VCCATDLLALCVLRPPGEFGVDVALGSSQRFGVPLCYGGPHAAFFAVKDNLVRMMPGRMV
GVTRDAAGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMYTLYHGPQGLKHIAE
RTHNAALILAEGLKRAGHRLHSEMFFDTLKINCSVAAKDILERAMQREINLRVYSEGVLG
VSLDETVTERDLDDLLWVFGCESSAELIAEKMGERVKGIMGSPFKRTSKYLTHQVFNSYH
SETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELMPITWREFANIHPFVPLDQAE
GYQKLFRQLEKDLCEVTGYDKISFQPNSGAQGEYAGLAAIKAYLNSKGESSRSVCLIPKS
AHGTNPASAQMAGMKVQVVEVDKDGNIDLAHLKALVDKHKASLAAMMITYPSTFGVFEEH
IRDICDLIHENGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGP
IGVKAHLAPFLPSHPVVAMQSINASSSLGTISAAPWGSSAILPISWAYIKMMGAKGLLHA
TEVAILNANYMAKRLEGHYKILFRGRKGFVAHEFILDVRPFKKTANIEAVDVAKRLQDYG
FHAPTMSWPVSGTLMIEPTESEDKAEMDRFCDALLGIRQEIADIEEGRMDSRINPLKMAP
HSLACISSSNWDRPYSREFAAFPLPFIRPETKFWPSISRIDDIYGDQHLVCTCPPMEVYE
SPYEEKRASS
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgcagagctgcgccaagtcctgggggatcttcttggccaagtcggtgagtcccagcgca
ccgtgcaggcatctgagtgtcaagagccgcgtggtttggaaacttcagtgtaggatccgg
aacagcggggcatccctgaccgcagcagcccggggtctgaggacgtctgccgccgtctcc
tccagacagatagagagaatactgcccagacatgatgattttgcagagaggcacatcggt
ccaggtgagagggagaagagagaaatgctggatgctctgggactcgagtcgatcgaccag
ttgatcgaaaacacagttccagcctccatccgtatgcagtggagtatgaaaatggatgat
ccagtctgtgagaatgagattctggagtctttacagaagatcgcatcaatgaacaaagta
tggaggtcctacatcggcatgggctactacaactgctcagtaccgccacccatccagcgt
aatcttctggagaatgcaggctgggtgactcagtacacgccttaccagcctgaggtctcc
cagggtcgcctggagtccctcctcaactatcaaaccatgatctgtgacatcacaggcatg
cctgtggccaacgcttccctgctcgacgagggcacggctgctgccgaagccatgcagctc
tgccacagacagaacaaaagaaggactttctacattgacccacgttgccatcctcagacc
attgctgtggtacaaaccagagccaactacattggggtgaaaacagtactgaagttgcct
catgagatggactttagtgggaaggatgtgagcggcgtgcttttccagtatccagacact
gatggcagggtggaagacttcactgcacttgtggaccgtgcacacaaaggaggggccctg
gtttgctgtgccacagatttgctagctctctgtgtgcttcgtcctcctggggagtttggt
gttgatgttgcactgggcagctctcagaggtttggggttcctctctgctatggcggtcca
catgctgccttcttcgctgttaaggacaacctggtccggatgatgcctggcagaatggtt
ggtgtcaccagggatgcagctggtaaggaagtgtatcggctcgctttgcagaccagagag
cagcacatccgcagagacaaagcaaccagtaacatctgcactgcacaggctctgctggcc
aacatggctgctatgtatacactctatcatggtcctcagggactcaaacacattgctgag
aggacacacaatgctgctctaatccttgctgaaggcctaaagagagcaggacaccggctg
cacagtgagatgttcttcgacaccttaaagatcaactgtagcgtggcagccaaagacatc
ctagagagagccatgcagagggagataaacctgcgagtctacagtgagggagtgttgggc
gtctctctggatgagacggtgactgagagggacttggatgacttgctctgggtctttggc
tgtgaatcgtcagctgagctgattgctgagaagatgggcgagcgggtgaaggggatcatg
gggagtcctttcaagaggacgagcaagtacctcacacaccaggtctttaacagttatcac
tctgagaccaacattgtgcgatacatgaagcgcctggagaacaaggacatctccctggtg
cacagcatgataccactgggctcctgcaccatgaaactgaatagttcttcagaactcatg
cccatcacctggagggagtttgccaacatccacccctttgtgcctctggatcaggctgag
ggctaccagaaacttttcagacagctggagaaggacctctgcgaggtgacgggctatgac
aaaatctccttccagccaaacagtggtgctcagggagaatatgctggcctggctgccata
aaagcctacctgaactcaaagggagagagctcaagaagtgtctgtttgatccccaagtca
gcccatggcaccaacccagccagtgctcagatggctggcatgaaggttcaggtggtggag
gtggacaaagatggcaacattgatctggcacacctcaaggccctggtggacaaacataag
gcgagcctggcggccatgatgatcacctacccctccacctttggtgtgtttgaggagcac
atcagagacatatgtgatcttattcatgagaacggtggccaggtgtacctggatggtgcc
aacatgaacgcccaggtgggtttgtgtcgtcctggagattacggctctgacgtgtctcat
ctgaacctgcacaaaaccttttgcatccctcatggtggaggaggacccggcatggggcca
attggagtgaaggcccacctcgccccattcctgccgagccacccagtggtcgccatgcag
tcgatcaatgctagcagctcactgggcaccatcagcgccgccccctggggctccagtgcc
atcctgccaatctcctgggcttatattaagatgatgggagccaagggactgcttcatgcc
acagaggtggccatcctcaacgccaactacatggccaagaggctggaaggtcactataaa
atcctattcagaggcaggaaaggttttgtagcccatgagttcattctggatgtgaggcca
ttcaagaaaactgccaatatagaggctgtcgatgtggccaagaggctgcaggattatggt
ttccacgcaccaaccatgtcatggccagtgtctggtacactcatgatcgagccaacagag
tcagaggacaaggctgagatggaccggttctgcgatgccttgctcggtatccgtcaggag
atcgcagacattgaggagggaaggatggactcccgcatcaacccactcaagatggcccct
cactctctggcctgcatctcgtcctccaactgggacagaccttactccagggagtttgct
gctttccccttgcccttcattaggcccgagaccaaattctggccaagcatctccaggatt
gatgacatctatggcgaccagcacctcgtgtgcacctgcccacccatggaggtctacgaa
tctccatacgaggagaagagagcctcctcatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (5)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (62)   

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