KEGG   Lates calcarifer (barramundi perch): 108880456
Entry
108880456         CDS       T04895                                 
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03420  Nucleotide excision repair
lcf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108880456
   03460 Fanconi anemia pathway
    108880456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108880456
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108880456
SSDB
Motif
Pfam: Rad10 HHH_5 HHH HHH_2
Other DBs
NCBI-GeneID: 108880456
NCBI-ProteinID: XP_018527504
UniProt: A0A4W6F253
Position
LG1:14878521..14882017
AA seq 360 aa
MKKRFNINLDDSAFTKERAPPKPQFLSSSKGGQITSASSTSSAKPAPESVDQPLSYAEYI
VQSKSTVAAAPQREAPLKLPTTEGAGVKSLKQTEPGSVSSATGRCETVQDCTKGTEGGSE
GVWRNEETQVAGTDPKEGSCQRSDASLSLGPKPVGSGSSIIVSPRQRGNPILKFVRSVPW
EFADIVPDYILGQTTCALFLSLRYHNLNPNYIHDRLKQLGQTFTLRVLLVQVDVKDPHHS
LKELARMCIMADCTLILAWSPEEAGRYLETYKSYEKKPADLLKEQVEKDYLSKVTDCLTT
VKSVNKTDAITLLSTFSSIEGIINASKEDLVLCPGLGPQKARQLYNVLHKPFLKSKTKDS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgaagaagaggtttaacatcaacctggacgattctgctttcaccaaagaaagagcaccg
ccaaagccgcagtttctgtcttcatctaaaggaggacagatcacctcagcctcatctaca
tcttcagcaaagcctgctcctgagtcagtggatcagcccttgtcttacgcagaatatatc
gtccaaagtaaaagcactgtggctgctgctcctcagagagaggctcccctcaaacttccc
acgactgaaggtgctggagttaagagcctgaaacaaactgagcctggttcagtatcgtct
gccactggaagatgtgaaacagttcaagactgtactaaagggactgaaggtggatctgaa
ggggtttggaggaatgaggagacacaggtggctggcacagacccaaaagagggtagctgt
caaagatcagatgcaagcctcagtctgggacctaaaccggtgggatctgggagcagcata
attgtcagtccccgacagaggggaaatcctattctaaagtttgtgaggagtgtcccgtgg
gagtttgcagatattgtaccagactatatcttgggacagacaacgtgtgctctcttcctc
agtctgaggtatcacaacctcaacccaaactatatccacgaccgtttgaagcagcttgga
cagacattcaccctacgagtgttactggttcaagtagatgtgaaagatcctcatcattca
ttgaaggagctggctcgcatgtgcatcatggccgactgcactctcatcttggcttggagt
ccagaggaggcagggcgttacctagaaacatacaagtcgtatgaaaagaaaccagcagac
ctactgaaggaacaagttgaaaaagactatctatcaaaggttacagactgtcttaccact
gttaagtctgtaaacaagaccgatgccattaccttactgtccactttctcgtctatagaa
ggaatcatcaatgcatctaaggaagacctggttctctgtccaggccttggaccacaaaaa
gcgagacaactctacaacgtgctgcacaaacccttcctcaagtcgaaaacaaaagacagc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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