KEGG   Lates calcarifer (barramundi perch): 108883904
Entry
108883904         CDS       T04895                                 
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
  KO
K04838  voltage-gated sodium channel type V alpha
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    108883904
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108883904
Ion channels [BR:lcf04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   108883904
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel IQ GPHH
Other DBs
NCBI-GeneID: 108883904
NCBI-ProteinID: XP_050926109
Position
LG4:complement(19459510..19490976)
AA seq 1950 aa
MAAMLLPTGPDGLRRFTRESLAAMEQRIAEEQAKNAKGCKEAQRNTEPPKPRADLEAGKQ
LPRIYGDIPPELIGVPLEDIDPFYYKNQRTFIVLNKGKAIFRFSATSALYIFSPFHFIRT
IAIKVLVHSLFSLFIMFTILTNCFFMAMSDPAPWTKYLEYTFTAIYTFESAIKILARGFC
LLPFTFLRDPWNWLDFTVIVMAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGLLRQKCVRSLAHCINSSYSPNASFICNN
RTWSSRADFLSSEDNFYKVEGAKDALICGYGSDAGKCPDGFDCLKVGRNPNYGYTSFDTF
GWAFLALFRLMTQDYWEKLFHQTLRSAGKTYMVFFVLVIFLGSFYLVNLILAVVAMAYEE
QNQATIAEAWQKEREFQLAMEHLRREQRLAKRQAQETDSVLSPELSPICLKAGSIRRSSS
RRRRSHRTLSEETAEEAAEEKFDPLDEPMPPLSPLPVHPLLATLSSHPLSTRRGSQNSIF
SSFRARNNSEADFGDDEYSIHGDAFRSRTSSTATPWKRRTGSVRSHCSQVFTPSLTVNGR
LNISLDQNGVTTVGLHTPTSMPAYSMERIREDTKPTSAEDPVPRPLPQPSPTVAEPPPVR
RNRGMSSVSFLSDAMDELEESRQKCHPCWYTFAKKYLIWDCCPSWLKMKECVKFMVMDPF
LDLGITICIVLNTLFMALEHYPMTDEFNTMLSVGNLVFTGIFTAEMVLKLIALDPYYYFQ
QGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKNYQDCVCKISIDCQLPRWHMKDFFHSFLIVFRVLC
GEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSSDNLSAPDEDGDL
NNIQIAIARIHSGVSWLITGVIDLCNRGLKRRKHKAKEANQSIKLVGNHVESNGGIYGRY
GEKYIIPEEDSYMTNPNLTVIVPIAPGESDVEFLEEEEISESSEDEDNKLEKISLSEGST
VDLRKPGEDIDNLSELAEESMEPEECFPELCMRHCQCCDIDTSQGLGQAWWRLRKTCYQI
VEHSWFETFIIFMILLSSGALAFEDIYIEKRKVVKVVLEYADKVFSYIFVLEMFLKWIAY
GFKKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFAAIKSLRTLRALRPLRALSRFEGMR
VVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNRTGFIHSITVVNNKSE
CLAMNDTQFFWTKVKVNFDNVGLGYLSLLQVATFKGWMEIMHAAVDSRGVEEQPIREINL
YMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKRKMSGQDIFMTEEQKKYYNAMKKLGSK
KPQKPIPRPANVLQAFFFDLVSKQAFDIMIMMLIIVNMVTMMVETDEQSDRMESILNKIN
LVFIVIFTTECLIKIFALRCYFFTVAWNIFDFVVIILSIVGIVLADIIEKYFVSPTLFRV
IRLARIGRVLRLIRAAKGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFAYVKK
QDGIDDMFNFETFGNSMICLFQISTSAGWDNLLSPIMSSSPEECDVNFVNTGTNTRGNCG
SPSVGIAFFVSYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFEMFYEVWEKFDS
EATQFIEFSMLSSFADTLSEPLRIAKPNRIKLISMDLPMVSGDRIHCLDILFAFTKRVLG
ESGEMDALKQQMEEKFMMTNPSKVSHEPITSTLRRKLEEVSAIIIQRCYRRHLVRRQMKQ
ASYLYRQINYETVVDVENAPETEGLIASMIQHYGPVGMETVQTMEDTLMSSPPSYDSVTR
AASDLSEIVRSISRDSKLGEPGENYEETFL
NT seq 5853 nt   +upstreamnt  +downstreamnt
atggcagccatgctgttaccaacgggtcctgatggcttgcggcggttcactcgcgaatcc
ttggctgccatggagcagcggattgcggaggagcaggccaagaatgccaagggttgcaag
gaggctcagaggaacacagagccacccaaacccagggccgacctggaggcaggcaagcag
ctgccacgcatctacggcgacatccctccagaacttattggggtgccactggaagacatt
gatcctttttactacaagaatcagaggacttttatagtacttaacaaagggaaggccatc
ttcagattcagtgccacatctgcactttacatatttagtccatttcacttcatcagaaca
attgccataaaagttttagtccattcattgtttagcctgttcataatgttcactatactg
accaactgtttcttcatggccatgtctgatccggctccatggaccaagtacctggagtat
actttcactgccatttacacttttgaatcagcgataaagatattagcgagaggattctgt
ctgttgccatttactttcttgagagacccgtggaactggctggacttcaccgtcattgtc
atggcatacctgacagaatttgtagatcttggaaacgtctctgcattaagaaccttcaga
gtactaagagccctgaaaaccatctcagttatcccaggtctgaagaccatcgtcggtgcc
ctgatccagtctgtgaagaagctggcagatgtgatgatcctaactgtcttctgtctcagc
gtgttcgccctcatcggcctgcagcttttcatggggctcttgcgacaaaagtgcgtccgt
agcctcgcacactgcatcaactcctcctacagccccaacgcatccttcatatgtaacaac
agaacctggagctccagggcagacttcctcagcagtgaagataatttttacaaggttgaa
ggagcgaaggatgccttaatatgtggatatggaagtgatgcagggaagtgtccagatgga
tttgactgcctaaaagtgggaagaaatccaaactatggctacaccagttttgacactttc
ggctgggctttcctggcccttttccgactcatgacacaagactactgggaaaaactgttc
catcagactctgcgctcagcagggaagacctacatggttttctttgtgctggtaatcttc
ctgggctccttctatctggtcaacctgatcctggctgtggtggccatggcctatgaggaa
cagaaccaggcaaccatcgccgaggcctggcagaaagagagagagtttcagctggctatg
gaacaccttcgacgagagcaaagattggcaaagagacaagcccaggagacagactcagtg
ttatccccagagttgtctccaatctgtctgaaggctggaagtatacgacgaagcagcagc
agaagaagaagatctcataggacgttgtcagaggaaacagcagaggaagctgctgaggag
aagtttgacccactggacgagccaatgcctcctctgtctcctctgccggtccaccctctg
ctggccacgctctcgtctcatcccctcagcaccaggagaggaagccagaacagcatcttt
agctccttccgggcgcgcaacaactcggaggctgactttggggatgacgagtacagcatt
catggggacgccttcaggagtcgcaccagttcaacagcaacaccttggaagaggaggaca
ggcagtgtgaggagtcactgctcccaggttttcacccccagcctcaccgtcaacggtcgg
ctcaacatttccctcgaccagaatggtgtcactactgtgggcttgcacactcccacctcc
atgcctgcttacagcatggagaggatcagagaggacacaaagcccaccagtgcagaggat
ccagttcccagacctctcccccagccttccccgacagtagctgagcctcctccagtgcgc
aggaacagagggatgagctctgtcagcttcctcagcgatgccatggatgagctggaggag
tcgaggcaaaagtgccatccctgctggtacacatttgccaagaagtacctgatatgggac
tgctgcccctcgtggctgaagatgaaggagtgcgtgaagttcatggtgatggatcctttc
ctggatctaggtatcaccatatgcattgtgctgaacacgctcttcatggccctggagcac
taccccatgactgatgagttcaacaccatgctctcagtgggcaatctggtgtttacaggg
atctttactgctgagatggtgctgaagctgattgccctggacccttactactacttccaa
cagggctggaacatctttgacggcgtcatcgtttgcctcagtctgatggagttgggtctc
tccaatgtagaggggctgtcagtcctgcgatctttcagactgttacgagtcttcaaactg
gccaagtcctggccaactctcaacactctcatcaagatcatcggcaactcggtgggcgcc
ctgggaaacctgactctggtgttggccatcattgtctttatctttgctgtggtcggcatg
cagctgtttggcaagaactatcaggactgtgtgtgtaagatctccattgactgtcagctg
cctcgctggcacatgaaggacttcttccactctttccttatcgtgttcagggtgctgtgc
ggcgagtggattgagaccatgtgggattgtatggaagtggcagggcagcccctctgcatc
ctggtgttcatgttggtcatggtcattggcaacttggtggtgctgaacctctttctggcc
ctgctgctcagctccttcagctctgacaacctctctgctccagatgaagacggtgatttg
aataacattcagatcgccattgcccgtatccactctggtgtctcctggctcatcacaggc
gtcatagacctctgcaaccgcggcttgaagcgtcgaaagcacaaggccaaagaagccaat
cagtctatcaagctggttggcaatcacgtggaaagcaatggggggatatatggacgctat
ggagagaaatacatcatcccagaggaggacagctacatgaccaacccaaacctcactgtc
attgttcccattgcacctggagagtcagatgtggagtttctagaggaggaggagatatca
gagtcatccgaggatgaagacaacaagctggagaagatcagcctgtcagagggcagcaca
gtggacctgaggaagcctggagaggacatagacaacttatcagagctggctgaagagagt
atggagccagaggaatgcttcccagaattgtgtatgaggcactgtcagtgctgtgacatc
gacaccagccaaggtctgggccaggcctggtggaggctgaggaagacctgctaccagatc
gtggaacacagctggtttgagaccttcatcatcttcatgattctgctcagcagtggggct
ctggcatttgaggatatctatatcgagaagagaaaagtcgttaaggtggtgttggagtat
gctgacaaagtcttctcctacatcttcgtgcttgaaatgttcctcaagtggattgcatac
ggcttcaagaaatattttaccaactactggtgctggctcgacttccttattgtggatgtg
tccttgataagtctggtggcaaattcactgggatattcagactttgcagccatcaagtcc
ctgaggaccctccgagccttgagacctctcagagctctgtccagatttgagggaatgcgg
gtggtcgtgaacgctcttataggagccatcccctccattatgaacgtgctgctcgtgtgt
cttatcttctggctcatcttcagcatcatgggagtcaacctgtttgctggcaagtttgga
aagtgtgtaaacagaacaggcttcatccacagcatcactgtagtcaacaacaagtctgag
tgcctcgccatgaacgacacccagttcttctggacaaaagtcaaggtcaactttgacaat
gtgggactcgggtacctttcccttctgcaagtggctacatttaaaggatggatggagata
atgcatgcagctgttgattcaagaggagtggaagagcagcccatcagagaaatcaacctc
tacatgtacctttacttcgtcgtcttcatcatattcggctccttcttcaccctcaatctc
ttcattggtgtcattattgacaatttcaatcagcagaaaagaaagatgagtgggcaggat
atcttcatgactgaagaacagaagaagtactacaacgctatgaagaaattaggatctaaa
aaaccacaaaagccaataccaaggcctgcgaatgttctccaagccttcttcttcgatctt
gtgtccaagcaagcctttgacatcatgatcatgatgcttatcatcgtcaacatggtgacc
atgatggtggagacagatgagcagtcagaccgcatggagtctatcctcaacaaaatcaac
ctggtcttcatcgtgatcttcaccacggaatgcctgatcaagatctttgcccttcgttgt
tatttcttcacagttgcatggaatatctttgattttgtggtgataattctctctattgtg
gggattgttcttgcagacatcattgagaagtactttgtatctccaaccctgtttcgagtc
atcagactggcaaggataggacgtgtacttcgacttatacgtgcagccaaaggaataaga
actttactgtttgccttaatgatgtccatgccagcactgttcaacattggcctcctgctt
ttcctcgtcatgttcatctatgctatctttggaatggcaaactttgcctacgtgaaaaaa
caagatgggattgatgacatgtttaactttgagacctttggaaacagtatgatctgcctt
tttcagatcagcacttctgcaggctgggacaacctcttgagtccaataatgtccagctca
ccggaagagtgtgacgttaactttgtcaacactggcaccaacacccggggaaactgcggc
agcccgtcagtgggcatagctttctttgtcagttacatcatcatttctttcctcattgtg
gtaaatatgtatatagctatcattctggagaacttcagtgttgccacagaggaaagcaca
gaaccactgagcgaggatgactttgagatgttttatgaggtttgggagaaatttgattct
gaggccacacagttcattgagttttccatgctgtcaagttttgctgacacattgtctgag
ccactgcgcatcgccaagcccaacaggatcaagctgatctccatggaccttcccatggtc
agtggggatagaatccactgcctggacatcctgtttgccttcacaaagcgagtcctggga
gagtcgggcgagatggatgccctcaaacagcaaatggaggagaagtttatgatgacaaac
ccctccaaggtttcccatgagcccatcacctccacactgcgccgcaaactggaggaggtg
tctgcaattatcatccagaggtgttataggaggcatctggtgcgccggcagatgaaacag
gcatcctacctctacagacaaataaattacgagactgtggtggatgtggagaatgctcca
gaaacagaggggctgatagcctccatgatacagcactatgggcctgtggggatggagact
gtacagaccatggaggacactctaatgtcctcaccaccatcttatgacagcgtgaccaga
gcagcaagtgacctctctgagattgtcagatcaatatccagagactctaaacttggggag
cctggggaaaactatgaggaaacgtttctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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