KEGG   Lates calcarifer (barramundi perch): 108884187
Entry
108884187         CDS       T04895                                 
Symbol
tpm4b
Name
(RefSeq) tropomyosin 4b isoform X1
  KO
K10375  tropomyosin 4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04260  Cardiac muscle contraction
lcf04261  Adrenergic signaling in cardiomyocytes
lcf04814  Motor proteins
lcf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    108884187 (tpm4b)
   04820 Cytoskeleton in muscle cells
    108884187 (tpm4b)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108884187 (tpm4b)
   04261 Adrenergic signaling in cardiomyocytes
    108884187 (tpm4b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108884187 (tpm4b)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     108884187 (tpm4b)
SSDB
Motif
Pfam: Tropomyosin CLZ Laminin_II DUF3450 ATG16 Crescentin Fez1 CENP-F_leu_zip ERM_helical TMF_DNA_bd Exonuc_VII_L Laminin_I DUF745 XhlA Nuf2_DHR10-like HrpB7 DUF4200 DUF1664
Other DBs
NCBI-GeneID: 108884187
NCBI-ProteinID: XP_018533414
UniProt: A0A4W6EEJ3
Position
LG4:complement(7433688..7443185)
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAESDQKAAEDKCKQLEDELLALQKKLKGTEDELDKY
SEALKDAQEKLELSEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEIAELKCGDLEEELKNVTNNLKSLEAQSDKYSEKEDKYEEEIKVLNDRLKEAETRAE
FAERTVAKLEKTIDDLEENLSHAKEENIGMHQVLDQTLQELSSL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccatcgac
agggcagaacaggctgagtctgaccaaaaagcagcagaggataaatgcaagcagctggag
gatgagctgcttgctctgcagaagaaactgaagggaacagaggacgagctggacaagtac
tcggaggccctgaaggatgctcaggagaaactggaactgtcggagaagaaggccacagat
gccgagggcgatgtggcatccttgaaccgcaggatccagctggtggaggaggagttggac
cgtgctcaggagagactggccacagccctgcagaaactggaggaggccgagaaggctgca
gatgagagcgaaagaggcatgaaggtgatcgagaacagagccatgaaagacgaggagaag
atggagattcaggagatgcagctcaaagaagccaaacacatcgcagaggaggccgaccgc
aaatacgaggaggttgctcgtaaactggtaatcctggagggtgagctggagagagcagag
gagagggcagaaattgcagaactaaaatgtggcgacctggaggaagagctcaagaacgtc
accaacaacctcaaatctctagaggctcagtctgataagtactcagagaaagaagacaaa
tatgaggaggagattaaagtcctgaatgacagactgaaggaggcggaaacccgtgcagag
ttcgcagagaggacagtggctaagctggaaaagaccatagatgacttagaagagaaccta
tcacatgctaaagaggaaaacataggaatgcaccaggtcctggaccaaacactgcaggag
ctaagtagcttgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (18)   
   Pfam (18)   
All databases (59)   

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