KEGG   Lates calcarifer (barramundi perch): 108884518
Entry
108884518         CDS       T04895                                 
Name
(RefSeq) potassium voltage-gated channel subfamily KQT member 5 isoform X1
  KO
K04930  potassium voltage-gated channel KQT-like subfamily member 5
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108884518
Ion channels [BR:lcf04040]
 Voltage-gated cation channels
  Potassium channel, voltage-gated (Kv)
   108884518
SSDB
Motif
Pfam: KCNQ_channel Ion_trans Ion_trans_2 Lig_chan TAF1C_HB
Other DBs
NCBI-GeneID: 108884518
NCBI-ProteinID: XP_018533954
Position
LG5:27318608..27455111
AA seq 1082 aa
MPRNHSGDEGGTGLWMRTSPGHRSEGYGLKDVESGRRMMNNAGDGLLSASAAAAGAAGSE
SLRGKQGARLSLLGKPLIYSAQSGRRNVRYRRLQNYLYNVLERPRAWAFIYHAFVFILVF
SCLVLSVFSTIPAHQDFSSYCLLILEFVMIVVFGLEYIIRIWSAGCCCRYRGWQGRLRFA
RKPFCVIDIIVLIASVAVVSAGSQGNIFATSVLRSLRFLQILRMVRMDRRGGTWKLLGSV
VYAHSKELVTAWYIGFLVLIFSSFLVYLVENKFNKEFATYADALWWGTITLTTIGYGDKT
PKTWTGRMLSAGFALLGISFFALPAGILGSGFALKVQEQHRQKHFEKRRNPAAYLIQCVW
RSYAADENSVSIATWKPHLKALHTCSPTKKEQGESTTSKIHSNKQKLLRRCTTRKHSQKL
SFKERVRMASPRGQSIKSRQTSSMNDRRSPVTESGTEGTSPAKVQKSWSFNDRTRFRPSL
RLKSQSRSTTDADSNMAGEDGFDEKGCHCEISVEDLLPSVKSVIRAVRIMKFHVAKKKFK
ETLRPYDVKDVIEQYSAGHLDMLCRIKSLQTRLDMIVRPQPLSSRAKTFSSPSLPVYYRQ
GRKNSTQGVDQILGKGQIPLDKKIREKLLSDGDILEDMSMLGRVCKVERQVQSIESKLDS
LLDIYRQVLRKGSSSALTLSSLPLFELEQTSDYHSSVFSKDLSCSTQVSSGGAPPPGGCI
TRSTTNSHLSQGGLHLILAPPNELNLNLNVSSSTPPSGLASSSFSPSPLPHHHHHHHHHH
PHHTHRHHTQAQAATPESGTDEAMGNSPPILTPSSISSGGGGGVGDRGFPLLPRLPPPLP
PSRSGGPSSLVRATSTEASPDMEDFCGGLGTKMEDSSVREDLGLGLGLDRLDQQLKSNTN
SNGRLNSKEEGSWRRHMSLELEPLVPPTLGCCSGPSQMDRGLGKSMSVQDLMQAHPGAAQ
DPHHSHSLSSPSPSTSSDSPIGFHSCSQDPGGGGGSGLGRSGGGGWGEEDLFISDRDIEA
QGFDFLSQGTAEAHTYSSELLRTGGRAGTGLRGSNHSLASGHASSPSAGSNELLNMPHVR
LK
NT seq 3249 nt   +upstreamnt  +downstreamnt
atgccccggaaccacagcggagacgaaggcggcaccgggctctggatgaggacgtcgccg
gggcaccgttccgaaggctacggcttgaaagatgtggagtccggacgaaggatgatgaac
aacgcgggagacggtttgctgtcagcttccgccgccgccgcaggtgctgccggttccgag
agcctgaggggaaagcagggagcgcggcttagcctgctggggaagccgctcatatacagc
gcgcagagcggccggagaaacgtcagataccggcggctccagaactacctgtacaacgtg
ctggaaagaccgagagcctgggcgttcatctaccatgcgtttgtgttcatcttggtcttc
agctgcctggtgctgtctgtgttctcaaccatcccggctcatcaggacttctcctcctac
tgtctccttatcctggagtttgtgatgattgtggtgtttgggctggagtacatcatccgg
atctggtccgcaggatgctgctgtcgctacagaggatggcagggacgactgcgctttgcc
agaaagcccttttgtgtcatagacatcatagtgttgatagcgtcggtagcagtggtgtcg
gcaggcagtcagggcaacatcttcgccacctcggtcttgcggagccttcgtttcctgcag
atcctacgcatggtgcgaatggaccgcagaggaggcacctggaagctgctgggctctgtg
gtctacgcacacagcaaggaactggtaactgcctggtacatcggcttcttggttctcatc
ttctcttcgttcctcgtctaccttgtggagaacaagttcaacaaggagtttgcaacctat
gctgatgccttgtggtggggcacgatcaccctgactaccattggctatggagacaaaaca
ccaaagacgtggacaggacgaatgctgtctgcagggtttgccctcctgggcatctccttc
tttgctttaccagcaggtattctgggctcaggctttgctctgaaggtccaagagcagcac
agacagaagcactttgagaagaggagaaacccagctgcctacctcatccagtgtgtttgg
cgtagttatgcggctgatgagaactcggtttccattgctacctggaagcctcacttgaag
gcgttgcatacctgcagccctacgaagaaggagcagggagagtccaccacaagtaaaatt
catagtaataaacagaagctactgaggaggtgtaccactcggaaacatagccagaagttg
agcttcaaggaacgggtgaggatggcgagccccagaggtcagagcatcaagagcaggcag
acgtcctcaatgaacgaccggcggtcaccggtgactgagtccggtacagagggcaccagc
cctgctaaggtacagaagagctggagcttcaatgaccgcacacgcttcagaccttcactc
cgccttaagagccagtcccgttccaccactgatgcagactccaacatggcaggggaggat
ggcttcgacgagaagggctgtcactgcgagatctcagtggaggacttgctgccctcagtc
aagtctgtcattagagctgtcaggatcatgaagttccatgttgccaagaagaagtttaag
gagacgctgcgtccttatgacgtgaaggatgtgattgaacagtactctgctggtcacctg
gatatgctgtgtcgcatcaagagcctgcagaccaggctggacatgattgtacgtccacag
cccctgagcagcagagccaagaccttttcctccccctccctccctgtctattacaggcag
ggcagaaagaactccactcagggagtggaccaaatcctcgggaagggccagatccctcta
gataagaagattcgagagaagctgctgtctgatggagatatattagaggacatgagcatg
ctaggtcgcgtctgtaaggtggagcggcaggtccagtcgatcgagtcaaagctcgactcc
ctgctcgacatttatcgtcaggttttgcgtaaaggctcgtcttcagccctcacgctctcc
tccctgcctctgttcgagctggagcagacctccgactaccactcctccgttttcagcaag
gacttgtcctgctccacccaggttagcagcggcggagcacctccacctggtggctgcatc
acacggtccaccaccaactcccacctttcccagggaggactccatctcatactggcacca
cccaatgagcttaacctcaatctcaatgtctcctcttccacacctccctctggccttgca
tcctcctcttttagcccgtctccgctgcctcatcaccatcatcaccaccaccatcatcat
cctcatcatacccaccgtcatcatacccaagctcaggccgccacacctgaaagcggcact
gatgaggctatggggaattctccacccatcctcaccccgagtagtatcagcagtggaggg
ggcggaggagtaggagacagagggtttcctctcctgccgaggcttccaccaccgcttcct
cccagccgaagtggtggcccgagcagcttggtgcgagcaacatccacagaggcatcccct
gacatggaggacttttgtggaggtctagggacaaagatggaggatagcagtgtcagggag
gacctaggccttgggttggggctggacagactggatcagcaactaaagagcaacaccaac
agcaatggcaggcttaatagcaaggaggagggctcctggaggaggcatatgagcctggag
ctggagcccctggtgccaccaaccctgggctgctgctctggccccagccagatggaccga
ggcttgggcaagtccatgtcagtgcaggatctgatgcaggcacatccaggggctgcccag
gacccccaccacagccacagcctgtcatctccaagtcccagtacgagcagtgactccccc
attggcttccacagctgtagccaagacccggggggaggagggggcagtggcctaggcagg
agtggtggaggcggatggggtgaggaggacctctttatcagtgacagggacatagaggcg
cagggatttgatttcctgtcacaagggactgctgaggcccacacctactcctctgagctc
ctgaggacggggggcagagcagggacagggctacggggctctaaccatagcctggccagc
ggtcacgcatcctcgccctctgctggcagcaacgaattgctgaacatgccacatgtacgg
ctaaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (67)   

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