KEGG   Lates calcarifer (barramundi perch): 108885800
Entry
108885800         CDS       T04895                                 
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00900  Terpenoid backbone biosynthesis
lcf01100  Metabolic pathways
Module
lcf_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    108885800
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lcf01006]
    108885800
Enzymes [BR:lcf01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     108885800
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     108885800
    2.5.1.29  geranylgeranyl diphosphate synthase
     108885800
Prenyltransferases [BR:lcf01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   108885800
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 108885800
NCBI-ProteinID: XP_018535797
UniProt: A0A4W6CD18
Position
LG16_LG22:complement(3524626..3536401)
AA seq 313 aa
MDGDAEAASERILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPEAVQVFTRQL
LELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDT
LGLFFQIRDDYANLSSREYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NMDIKRYCVDYLEKVGSFAYTRQTLRDLEVEAYRLIGEFGGNPELESLVKHLSKMHHEAE
AEPSTEPHSSQNH
NT seq 942 nt   +upstreamnt  +downstreamnt
atggatggtgacgcagaagcagcctccgagcgaattctgctggagccgtacaagtacttg
ttgcagctgccagggaagcaggtgaggacaaaactcgcccaggcgttcaaccactggctc
aatgttccagaggacaaactgcaggtgatcatcgaggtgactgagatgctgcacaacgcc
agcttgctcatagacgacatcgaggacagctccaagctgcggcgaggcttccccgtggcc
cacagcatctacggcattccctccgttatcaactccgccaactacgtctacttcctgggt
ctggaaaaggtgctgaccctggagcatcccgaggctgtccaagtgttcacccggcagctg
ctggagctgcaccgtggccagggcctggacatccactggagggacacctacacgtgtccc
accgagcaggagtaccgcaacatggtgctgcagaaaactggagggctctttggcttggcc
gtgggcctgatgcagctcttctcagactggaaacaggacctgaagccacttctggacacg
ctgggcctcttctttcagatccgcgatgactacgccaacctgagctcccgcgagtacagc
gagaacaaaagcttctgcgaggacctgacggaggggaagttctccttccccaccattcat
gctatatggtcgcgtccggagagcacccaggtgcagaacatcctccggcagcgcacggag
aacatggacatcaaacgatactgtgtggactacctggagaaggtaggctcattcgcctac
acccgtcagactctgcgggacctggaggtagaagcctaccgtctgatcggggagtttggg
ggaaaccctgagctggagagtttggtcaaacacctcagcaaaatgcatcatgaagctgag
gcagagcccagtactgagccacactccagccaaaaccactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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