KEGG   Lates calcarifer (barramundi perch): 108888067
Entry
108888067         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-A2-like
  KO
K06820  plexin A
Organism
lcf  Lates calcarifer (barramundi perch)
SSDB
Motif
Pfam: Plexin_cytopl Plexin_RBD TIG TIG_2 Sema TIG_plexin PSI RasGAP PSI_integrin Phage_int_SAM_1
Other DBs
NCBI-GeneID: 108888067
NCBI-ProteinID: XP_018539370
Position
LG12:6246501..6316399
AA seq 1911 aa
MGTSLDKGWTYCGLTKGHGPLKVMSWPLALWLLTLISVNQKTSAGQTLNTFQSERREWSL
NHLTVHQSTGALYVGAVNRIYKLSANLTLLVSHDTGPEYDNKACYPPLIVQPCSEPLAST
DNVNKLLLIDYSHNRLLACGSLYQGVCKLMRLDDLFILVEPTHKKEHYLSSDNQTGTMYG
VVVPSQGQDATLYIGTAVGGKQDYFPTISSRKLPRDPESSAMLDYELHTDFVSSLIKIPS
DTLALVPHFDIYYIYGFASGSFVYFMTVQPETPENGMPAGGSPGDLFYTSRIIRLCKGDK
KFHSYVSLPVGCVHRGEEYRLLQAAYLAKAGRVLARSLNISSQEDVLFAVFSKGQKQYHD
PLDHSALCVFTIQDINTRIKERLQSCYQGEGNLELHWLLGKDVQCTKAPVPIDDHFCGLD
INQPLGGSQLVSGRTVFTESRDRLTSVTSYIYNGHSVVFLGTRSGQLKKIRVDGPLEGGV
LYETVTVMKDSSAILRDMAFSLDRNSLYVMSDHQVAQVPVEACGQYGTCAECLSSGDPHC
GWCVLYNMCSRKDRCQRAEETFRFATDIDRCVKVIAHPDSIAVSAHGVPLLLEVNNVPDL
SAGITCSFGQQAEVEGHVKGNRVMCLSPAGKEVPQIPEGQDWAGVELRLNSKETGQMVAS
TEVKFYNCSTHQTCLSCVNSTFRCHWCKYRNLCTHDPSSCSFQEGRVNASEDCPQLLHSG
EILIPAGEVRPITLRARNLPQPQSGQRGYECVVHVQGVSHRVTALRFNSTSVQCQNSSYM
YEGVKISDLAVDLSIVWNGNFIIDNPEKIKVHLYKCSAQRDSCGMCLRAERKFQCGWCSG
EGRCTMKQHCPPISPYASRWLDLSARNVKCTNPRITEVSPVAGPLEGGTLVTIQGLNLGL
SFSELEGNVEVAGVQCTPQEEGYITAEQIVCEMAAAPKGSAPGPVKLCVGECRPELRAQS
SQFYSFVVPSMLALTPGRGPESGGTKVTIVGENLGAGSTVNVYFGNQTCELYRRTMSEIV
CFSAPSVTGAGPVQVSLSVDRAKVPGSLAFEYIEDPTVQRIEPLWSITSGHTTLTVTGTN
LDVVQEPRVRVKYAGHESVNVCKVLNTTTISCFAPSLKAEYSADQETIKHVDEFGFVFNN
VQALLTYNNTSFVYYPNPYLEPLSLSGVLEQKPGAPIILKGRNLVPSASGGARLNYTVLI
GDTPCSLTVSDTQLLCEPPNLTGQHKVLVQVGGLHISPGEVHIRSDSLLTLPAIFSITAG
GGLLLIIVIIVLLAYRRKSHENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTS
DLDRAGIPYLDYRTYAMRVLFPGIDDHPVLRELEVPGSGQANVEKALKQFAQLVNNKVFL
LTFIRTLELQRSFSMRDRGYVASLIMTALQGRLEYATDILKHLLSDLIERNLESKNHPKL
LLRRTESVAEKMLTNWFAFLLHKFLKECAGEPLFMLFCAIKQQMEKGPIDSITGEARYSL
SEDKLIRQQIEYKTLTLSCVNPDNENSPEIPVKVLNCDTITQVKEKILDAVYKNMPYSQR
PRAADMDLEWRQGRTARVVLQDEDITTKIESDWKRLNTLIHYQVSERCVVALVSKQMSSF
NIPSSASFPRSISRYGVDVPFRSTPTSPDSPHSRVPMLTPDLESGVKVWHLVKNHDHGDQ
KEGERGSKMVSEIYLTRLLATKGTLQKFVDDLFETLFSTVCRGTALPLAIKYMFDFLDEQ
ADRHGIHDMDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCS
TSEHRLGKDSPSTKLLYAKDIPHYKSWVERYYADINRLPAISDQDMNAYLAEQARLHSSE
FNVLSALHEIYAYVSKYSQEIIEALEQDEQAQKQKLAYKVEQIISVMSTES
NT seq 5736 nt   +upstreamnt  +downstreamnt
atgggaacgagcttggataaaggatggacttactgcggcctcactaaaggtcatggtcct
cttaaggtcatgtcatggcccctggcactgtggctattgactctaatctctgtgaatcaa
aagacatctgctggacagactctgaacaccttccagtcagagaggagggagtggtcactg
aaccacctgactgtgcatcagtccactggggctctgtatgtcggagctgtcaaccgaatc
tacaagttgtctgccaatctcaccctcctggtgtcccatgacacagggccagagtatgac
aacaaagcatgttatcctccactgattgtccagccctgctctgagcctttggcttctact
gacaatgttaataaactgttgctcatcgactattctcacaacaggctgttggcctgtggc
agcctctaccagggtgtctgcaagctaatgaggctggacgacttgttcatccttgtggag
cccacacataagaaagagcattacctgtccagtgacaaccagacagggacaatgtatgga
gtcgttgtgccctcgcagggtcaggatgccactctctacattggtacagcagttggaggc
aagcaggactacttcccaactatctctagccgcaagctgccacgtgacccagaatcctcc
gcaatgctggattatgagcttcacactgactttgtttcatctctcatcaaaatcccctca
gacacactggctcttgtcccacactttgacatctactacatctatggcttcgctagcggc
agcttcgtctatttcatgaccgtccagccggagactccagagaacgggatgcccgccggc
ggctcccctggtgacctgttttacacctcccgcatcatccgcctctgcaaaggtgacaaa
aagttccactcttatgtgtcacttcctgtggggtgcgtacacagaggcgaggagtaccgt
ctgctgcaggcggcctacctggccaaggctggcagggttctggcaaggtcgctcaacatc
agctctcaggaggacgtgctctttgctgtgttctccaagggacagaagcagtaccacgac
cctctggatcactccgctctctgcgtcttcaccatccaagacatcaacacacgcatcaaa
gagcggctgcaatcctgctaccaaggagaggggaacctggagctgcactggctgctggga
aaggacgtgcagtgcaccaaagcgcccgttcccatcgatgaccacttctgcggcctggat
ataaatcaacccctggggggttctcagctggtgtcgggtcggacagtgttcactgagagt
agggacaggctgacctctgtcacctcctacatctacaatggacacagtgtggtgttcctg
ggcaccagaagtggacaattgaagaagatcagggtggacggccctctggagggaggagtg
ctgtacgagacagtgactgtgatgaaggatagcagcgccatcctccgggacatggccttc
tccctggacaggaactctctttatgtcatgtctgaccatcaggtggctcaggtcccagtg
gaggcctgtgggcagtacggtacatgtgctgagtgcctgagctctggtgacccccactgt
ggctggtgtgtcctgtataacatgtgctcgaggaaggatcggtgtcagagggcagaagaa
accttccgtttcgccactgacattgaccgctgtgtgaaagtcatcgctcatccagacagc
attgctgtatcagcacatggtgtccctcttctgctggaggtaaataatgttccagacctt
tctgctggaatcacctgttcatttggccagcaagccgaagtggagggtcacgtcaaaggc
aacagggtcatgtgtctgtccccggctgggaaggaggtccctcagataccagagggacaa
gactgggctggtgttgagcttcgtctaaactcaaaggagacaggtcaaatggtcgccagc
acagaggtgaagttctacaactgcagcacacatcaaacgtgtctgtcctgtgtaaacagc
acttttcgctgccactggtgtaaataccgcaacctgtgcacccacgacccaagcagctgt
tctttccaggagggcagagtcaacgcctctgaggattgccctcagctccttcactctggg
gaaatcctcattccggccggtgaggtccgacccatcaccctgagggcccgaaaccttccc
cagccacagtcgggccagcggggctacgagtgcgtggtgcacgtgcagggtgtcagccac
cgtgtcacggcgctgcgcttcaacagcaccagcgtgcagtgccagaacagctcgtacatg
tacgagggtgtgaagatcagtgacctggcagtggacctctccatcgtatggaacggcaat
ttcatcatcgacaatcccgagaagattaaagtgcacctctacaagtgcagcgctcagcgg
gacagctgtggcatgtgcctgcgggcggagaggaagttccagtgtggctggtgtagcggc
gaaggccgatgcaccatgaagcagcactgtcctcccatctccccttatgcgagccgctgg
ctggacctctctgccaggaatgtcaagtgcaccaacccacgcattactgaggtgagccca
gtggcagggcctctggaggggggcacactggtcaccatccagggcctgaacctgggtctg
tccttctctgagctggagggtaacgtggaggtggcaggagtgcagtgcaccccacaggag
gagggatatatcactgcagaacagattgtatgtgagatggccgcagctcctaaaggaagt
gcaccaggtccagtcaagctctgtgttggcgaatgtagaccagaactacgtgcacagtcc
tcccagttctactcttttgtggtcccttcaatgctggctctgaccccaggcagagggcct
gaatctgggggcaccaaagtcactattgttggggagaatctgggcgctggcagcactgtt
aatgtttactttggtaatcagacctgcgagctatacaggaggaccatgtcggagattgtg
tgcttctctgcaccatcagtaacaggagcggggccagtgcaggtcagtttgagtgttgac
cgagccaaagttcctgggagtctggcctttgagtacatcgaagaccccacagtccagcgc
attgaacccctatggagcattaccagtggacacaccaccctgacagtgactgggaccaac
ctggatgtagttcaggagccgcgagtcagagtcaaatatgccggccatgaatctgtcaat
gtgtgcaaagtgctgaacacaaccaccatcagctgctttgctccctctctgaaggcagag
tactccgcagaccaggagaccatcaaacacgtggacgagtttggcttcgtcttcaacaac
gtccaagctctgctcacttacaacaacacgagcttcgtctactaccccaacccttacctg
gagcccctcagcctatcaggtgttctggagcagaaacctggagctcccatcatactcaaa
ggacgtaacctggtgccatctgcatctggtggagccaggctgaattacacagtgctgatt
ggagatacgccctgctctctcactgtgtctgacactcagttactctgtgaaccaccaaac
ctcaccgggcagcacaaagtcctggtccaagtgggaggactccacatctccccaggagaa
gttcatattcggtccgacagcctgctcacccttcctgccatcttcagcatcacagctgga
ggagggctgctcctcatcattgtcattatagtcctactggcctacagacgaaagtcacac
gagaatgacctcactttgaagcgcctgcagatgcagatggacaatctagagtcccgagtg
gctctggagtgcaaggaggcctttgcagaactacagacagacatcaacgagttaaccagt
gatctggacagagctggcatcccctacctggactatcgcacttacgccatgagggttctc
ttcccgggcatcgatgatcaccctgtgctcagagaactggaggtgccggggagcggacag
gcgaatgtggagaaagccttgaagcagtttgctcagctggtgaataataaggttttcctg
ctgacattcatccgtacgctggagctgcagcgctccttctccatgcgcgaccgcggctac
gtcgcctcgctcatcatgaccgctctgcagggacggctggagtacgccacggacatcctc
aaacacctgctctcggaccttattgagcgcaacctggagagcaagaaccaccccaaacta
ctactacgaagaacagagtcggtggcagagaagatgctgacaaattggtttgccttcttg
ctccacaaatttctcaaggagtgtgctggcgagcctctcttcatgctgttctgtgccatc
aaacagcaaatggagaagggacccatagactccatcactggagaggcacgctattccctc
agtgaggacaagctcatccgacagcagattgaatacaagacgctgacgctgagctgtgtg
aacccagacaatgagaacagccccgaaatccctgtcaaggtgctcaactgtgacaccatt
acccaggtaaaggagaagattctggatgcggtgtacaagaacatgccctactcacagcga
ccacgagctgcagacatggatctagagtggaggcagggcagaacagctcgtgtggtcctc
caggatgaggacatcaccaccaagatagagagcgactggaagagactcaacacactcata
cactaccaggtgtctgagcgctgtgttgtggccttggtgtccaaacagatgtcgtctttc
aacattccttcctcagccagcttcccacgcagtatcagcagatacggtgtggacgtaccc
ttccgctccacccccaccagccccgacagcccccactcccgtgtgcccatgctgacacct
gacctggaaagtggggtcaaagtttggcacttagtcaagaaccacgaccatggagaccag
aaagagggagagcgtggcagcaagatggtgtctgagatctacctgacgaggctactagca
acaaagggcacgctgcagaagtttgtggatgacctgtttgagactctgttcagcacagtg
tgtcggggcactgccctgcctcttgcaatcaaatacatgtttgactttctggatgagcag
gctgacagacacggcatccatgacatggatgttcgccacacgtggaagagcaactgcctg
ccactgcgtttctgggtaaatgtgatcaagaacccccagtttgtgtttgacatccataaa
agcagcatcaccgacgcctgtctttctgtggtggcccaaacctttatggactcttgctca
acatctgaacaccgtctgggcaaagactctccctccaccaaactactctatgctaaggac
ataccacattacaaaagctgggtagaaaggtactacgctgacatcaatcgcctgcctgcc
atcagtgatcaggatatgaatgcctatctggctgagcaggctcgccttcactccagtgag
ttcaacgtgcttagtgccctccatgagatctatgcttacgtcagcaagtacagccaagag
atcattgaggcactggagcaggatgaacaggcccagaagcaaaagttggcgtataaagtg
gagcagatcatctcagtcatgtctaccgagagctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system