KEGG   Lates calcarifer (barramundi perch): 108893649
Entry
108893649         CDS       T04895                                 
Symbol
cpeb4b
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4b isoform X1
  KO
K02602  cytoplasmic polyadenylation element-binding protein
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04114  Oocyte meiosis
lcf04914  Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    108893649 (cpeb4b)
 09150 Organismal Systems
  09152 Endocrine system
   04914 Progesterone-mediated oocyte maturation
    108893649 (cpeb4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108893649 (cpeb4b)
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     108893649 (cpeb4b)
   Factors involved in mRNA localization
    Trans-acting binding proteins
     108893649 (cpeb4b)
   mRNA cycle factors
    P-body specific factors
     108893649 (cpeb4b)
SSDB
Motif
Pfam: RRM_7 CEBP_ZZ RRM_1 zf-U1
Other DBs
NCBI-GeneID: 108893649
NCBI-ProteinID: XP_018547360
UniProt: A0A4W6EZ14
Position
LG20:complement(19117328..19149191)
AA seq 753 aa
MGDYGFGVLVQNNTGNKSAFPVRIHPHLQPPHHHQNVSQSPAAFINSTTAAGNGTTGGSP
WLFPASATHNSVQDEILGGPEKPKAQQQQEMQETQEKQQQLSPGSHQEGGSGGGIISELE
KARSEEAKTDNGTSEGSNGKEKQLRLESPVLTGFDYQETSGLGGTGPVQSSTTSSSLTGF
NNWSAAIPPAPSTIINEDVSFFNPASANNGPLLFQNFSHHVSPGFGGNFSPQIGPAAALS
QHHPAPPPHPHFQHPHNQHQQHRRSPASPHPPPPFPHRNPAFSQLPHLSNSLNKPPSPWG
PASYQSPSPSPGSSTSWSPGGGYGSGGGGWGGSQGRDYRRGLNGGMTPINSISPLKKTFP
NNHVASQKYPRNSPAGFNPKSWMDDGVGRSDNIFPFQERTRSFDSFNMNTLESSLIDIMR
AEQDTLKGRLGFPHPGGDNPLPLNARNYSRRRGHSSLFPMEDGFPDDERGDQGLAGLGSP
HCFPHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKG
YAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPL
DPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYI
AAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEY
CWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgggggattacgggtttggagtcctagttcaaaacaacactggcaacaagtctgcattc
ccggtccgaatccacccgcatctgcagcccccacaccaccaccagaatgtgtcgcagagc
cctgctgctttcataaacagcaccacagccgcagggaatggcaccacgggaggctctccc
tggctcttccctgcctctgccacccacaacagcgtgcaagacgaaatcctggggggccca
gagaagcccaaagcacagcagcaacaggaaatgcaggaaacgcaagaaaagcagcagcag
ttgtcccctgggagtcaccaggagggtggaagtggtggtgggatcatttcagaactggaa
aaagcccggtcagaggaagccaagacagacaacggcacatctgaaggaagtaacggaaag
gagaagcagctacgtctcgagtctccagtcctgacaggctttgactaccaggagacatct
ggtctcgggggaacaggcccagtccagtccagtacaacctcgtcatcacttactggcttc
aacaactggtcggctgccatcccgccggcaccatcaaccatcatcaatgaggacgtcagc
ttcttcaacccggcgtctgccaacaatgggcccctgctgttccagaacttctcacaccac
gtcagtccaggatttggggggaacttctccccccagatcggaccagcggcagccttgtcc
cagcaccaccctgctcccccgccacacccccacttccaacatccccacaaccaacaccag
cagcaccggcgctccccagcctctccacaccctccaccgccctttccgcacaggaatccg
gctttcagccagttgccgcatttgtccaacagcctgaacaagcccccgtccccctggggt
ccagccagctaccagagcccctctccctcccctggttcctccacctcctggagtcctgga
ggaggctatggtagtggtggcggtggctggggagggtctcagggcagagattatcgcagg
gggctgaacggcgggatgacccccatcaactctatctctccactgaagaagaccttccct
aacaaccacgtggcatcccagaagtatcctcgaaacagtcccgccggcttcaaccccaag
tcctggatggatgatggagtcggccgcagtgataacatcttcccctttcaggaacgcacc
aggtcatttgacagcttcaacatgaacacactggagagctccctgatcgacatcatgagg
gctgagcaggacaccctgaaaggtcgtcttgggtttccccatccaggcggggacaaccct
ctgcccctcaatgccaggaattatagcaggagacgaggccactcttctctcttccccatg
gaggatggtttcccagatgatgagcgtggagatcagggtctcgcgggcctgggatctcca
cactgctttccacaccagaacggagagcgtgttgaacgctactcgcgcaaggtctttgtc
ggaggactgcccccggatatagacgaagatgagataacagccagtttccggcgttttgga
cacctgtttgtggactggcctcacaaagctgagagcaaatcctatttcccccccaaaggc
tatgccttcctgctgttccaggatgagagctccgtgcaggctttgatcgatgcctgcatc
gaggaggacggcaagctgtacctctgtgtgtccagccccaccatcaaagacaagccggtc
cagatccgcccatggaacctgaatgacagcgattttgtgatggatggatctcagcccctg
gacccgaggaaaaccatctttgtgggaggtgtccctcgtccgctccgtgcagtggagctg
gccatgatcatggaccgcctgtatggtggcgtttgctacgctggcattgacacagaccct
gagctgaagtaccccaaaggagcggggcgggttgccttctctaatcagcagagctacatt
gctgctatcagtgctcgctttgtacagctgcagcatggagaaatcgataaacgggtggaa
gtgaagccatacgtactggatgaccagttgtgtgatgagtgccaggggactcgctgcggc
ggcaagtttgcaccgttcttctgcgccaacgtcacctgtctgcagtactactgcgagtac
tgctgggcggccatccactcgcgtgccggacgagagtttcacaaacccctggtgaaggag
ggaggcgaccgaccccgtcacatctccttccgctggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (45)   

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