KEGG   Lates calcarifer (barramundi perch): 108894551
Entry
108894551         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lutropin-choriogonadotropic hormone receptor-like
  KO
K04248  lutropin-choriogonadotropic hormone receptor
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04020  Calcium signaling pathway
lcf04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    108894551
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108894551
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:lcf04030]
    108894551
G protein-coupled receptors [BR:lcf04030]
 Rhodopsin family
  Peptide
   Lutropin-choriogonadotropic hormone
    108894551
SSDB
Motif
Pfam: 7tm_1 LRR_8 LRR_5 LRRNT
Other DBs
NCBI-GeneID: 108894551
NCBI-ProteinID: XP_050932764
Position
LG16_LG22:complement(5344109..5354244)
AA seq 673 aa
MAPRAVWLLIALSGVLNAHSCWAYTCPTICHCSADTFQCSRDTQLASRAGTASVPRLWLT
HLPFKEVPTHAFKELINITRIEISQSDCITQIQRHAFLSLHSLAQISVQNINSLRVIEKG
AFTDLPKLEYLSISNTGMIHFPDFTTISSLAPNIILEMADNMRIDFIPANSFHGITEEFV
DMNLVRNGFKEIKSHAFSGTKVNTLILRDNIHLSYIQDDAFEGATGPSSLDVSSTALSSL
PPKGLRQVRFLKAGSAFALKSLPPLESLAELLEAELTYPSHCCAFHTWRRKQRESALKNF
TKFCDLSETETEPTADGVNLADDINFQYPDLEFDCLNNPFVKCTPKPDAFNPCEDLLGFP
FLRCLTWIITVFAVTGNLAVLVILLIGHRKLTISRFLMCNLAFADLCMGLYLMLIAFMDH
YSRHEYYNHATDWQTGPGCGIAGFLTVFASELSVYTLTVISLERWHTITNAMHVNKRLQM
HHVAAMMGAGWGFALLVALLPLVGVSSYSKVSICLPMDIDTLGSQVYVVAVLILNVVAFI
VVCYCYICIYLSVHNPEHSTRHGDTKIAKRMAVLIFTDFICMAPISFFAISAALCMPLIT
VSHSKILLILFYPINSLCNPFLYTIFTRAFRKDMCLLLSRCGCCPASAXFQVTYSGFTPH
MYPKNVHQKTSFT
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggctccccgggcggtctggctcctgatcgcgctgtccggtgtcctgaacgcgcactcc
tgctgggcttatacctgcccgaccatctgccactgcagcgccgacacttttcaatgcagc
agagacactcagctggcctcccgggcagggacagcatccgtgcctcgactgtggctcact
catctgcctttcaaagaagtccccactcatgccttcaaggaactgatcaacatcacaaga
attgagatttcccagagcgactgcatcacacagatacagagacatgccttcctctccctc
cacagcttggcgcaaatttcggtgcagaatatcaacagtctgagagttattgaaaaaggg
gccttcactgacctgccaaaactggaatatttgagcatctctaacacaggaatgatacac
ttcccagacttcacaactatctcttccttggcaccaaatattatcctagaaatggcagac
aacatgaggatcgacttcattcctgccaattctttccacggtatcacagaggagtttgtt
gacatgaacctggttagaaatggcttcaaggaaataaaatctcacgcattcagcggaacc
aaggttaacacactaattttgagagacaacattcatctcagttacattcaagatgacgct
tttgaaggagccacaggtccaagttctctggatgtttcctccacagctctgagttccctt
ccgcctaaggggttgaggcaggtgaggtttctgaaagccggctctgcctttgctctgaag
agcctccctccactggagagcctggctgaactgctggaggctgagctcacgtaccccagc
cactgctgcgccttccacacatggcgtcggaaacaaagggaaagtgccttaaagaacttc
acaaagttttgtgatctcagtgaaacagaaacagagcccaccgctgatggagtgaatctt
gctgatgacatcaacttccagtatccagacctggaatttgattgtcttaacaaccccttc
gtcaagtgcaccccaaagccagatgcttttaacccctgcgaggacctgctgggctttccc
ttcctacgctgtctcacctggataattactgttttcgctgtgacgggtaacctggctgtt
ctggttattctgctaattggccaccgtaagctaaccatctccagatttctcatgtgtaac
ctggctttcgccgacctgtgcatggggctctacctgatgctcattgccttcatggatcac
tattcccgtcacgagtactacaaccacgctacggactggcagacggggcctgggtgtggc
atagcagggtttttgacagtgtttgccagtgagctatcagtatatacactgactgtgatt
agccttgagcgctggcacaccatcaccaatgccatgcatgtcaacaagaggctgcagatg
caccatgtggcagctatgatgggggcaggctggggcttcgctctgctggttgccctgctc
cctcttgtgggggtcagcagttacagcaaagtgagcatctgtctgcccatggacattgac
acgcttggctctcaggtttacgtggtggctgtgctcattctcaacgttgtcgctttcatc
gtggtctgttactgttacatatgcatatatctgagtgttcacaacccagaacactctact
cgtcacggggacaccaagattgccaaacgcatggctgtgctcattttcacagactttata
tgcatggctccaatctccttctttgccatctctgcagccctgtgtatgcccctcataact
gtgtctcactcgaagatcctgctcatccttttttatcccatcaactccctctgcaacccc
ttcttgtacaccatcttcacaagggctttcaggaaggacatgtgcctgctgctgagtcgc
tgcggctgctgccctgccagtgccncatttcaggtcacatactctggcttcacacctcac
atgtacccaaaaaatgtccaccagaaaacctcattcacttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system