KEGG   Lates calcarifer (barramundi perch): 108896959
Entry
108896959         CDS       T04895                                 
Name
(RefSeq) DNA repair and recombination protein RAD54-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    108896959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108896959
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     108896959
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 Rad54_N
Other DBs
NCBI-GeneID: 108896959
NCBI-ProteinID: XP_018551824
UniProt: A0A4W6CUM7
Position
LG17:complement(610213..620261)
AA seq 740 aa
MRRSLAPSQVAKRKQAGDSCEDEDWTYRTEKRRKGDNETRENHISPFRKPLTQLNDRPPC
MDGDKHEAFIRSILSKPFKIPILNYTGSLGIRALGLKRAGVRKALHDPFAEDALVLYEPP
TLSAHDLIKADKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRISESYGCIMADE
MGLGKTLQCITLMWTLLRQSPDAKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAID
GGSKDEIDRQLVNFMSQHGLRVPTPILIISYETFRLHAGVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKG
RDADASDKDRQTGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELY
KRFLRQAKPVETLQEGKISVSSLSSITSLKKLCNHPALIYEKCVEGEEGFEGALDLFPPG
YCTKAVEPQLSGKMLVLDYILAITRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FALNEETASDTHDKFRCQRCVNGREVRPPAEDSDCTSDLSQWNHCFSKKGLRDQVLKASW
DAAVSFVFHQRSHEDQRGVL
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgagaaggagtcttgctcccagtcaggttgctaaacggaagcaagcaggggattcctgc
gaagatgaagattggacgtacagaactgagaaaagaagaaaaggtgataatgagacaaga
gagaaccatatttctcccttcagaaaacctctgacacagctcaacgaccggcctccatgt
atggatggtgacaaacacgaagcatttattcgaagtatcctctccaaaccgtttaagatt
cctattctaaactacacaggctcgctgggaatcagggcacttggtctaaagcgtgcagga
gtaaggaaagcgcttcacgatcccttcgcagaagatgctttggttctttatgagcctccg
actctgagcgctcatgacctgatcaaagctgacaaggaaaaagtacctgtccatgttgtt
gtggatccagtcttaggaaaagtgctcagaccccatcagagagagggagtgaaattcctg
tgggagtgtgtgacaggccgacgcatctcagaatcatatggctgcatcatggctgatgag
atgggcctggggaagactttacagtgtatcactctcatgtggaccctgctacgccaaagc
cctgatgctaagccagagatagacaaagccatcgtggtctcaccttccagtctagttcgc
aactggtacaatgaagtcggaaaatggctgggaggacgcgtgacaccagtggccatcgac
ggaggttcaaaggatgagatcgatagacagttagtgaacttcatgtctcagcatggtttg
agagtcccgaccccaatcctgatcatttcatatgagacatttcgactgcatgctggggtt
ctgcacaaaggcaaagtcggacttgtcatctgtgacgagggccatcggctgaagaactca
gacaaccagacgtaccaggccctgaatgccatgagtgcccagaggagagtgctgatatca
ggcactcccatccagaatgacctgctggagtacttcagcctggtccactttgttaatgct
gggattcttggtacagcccaggagtttaaaaaacgttttgagcttcctatcctcaagggc
agagatgcagatgccagtgataaagacagacagacaggagaggagaaactcaaggaactg
atcagcatcgtcaacaggtgtttgattaggagaacatctgatatcttgtctaagtacctt
cctgtgaaaattgagcaggttgtgtgttgcagactgactcctctgcagacagagctctat
aagcgcttcctgagacaggccaaacctgttgagacattgcaggagggaaaaataagtgtc
tcctccttgtcctctatcacgtcactgaagaaactgtgcaatcacccagcacttatctat
gagaagtgtgtggagggtgaggagggctttgagggggcactggatctgtttccacctggc
tactgcactaaagctgtggagcctcagctctctgggaaaatgctggttcttgattacatc
ctggcaataacaaggacaacaactagtgacaaagtggtgcttgtctccaactacactcaa
acactggacctctttgaaaagctgtgcagatctagaagatacctctatgttcgactggat
ggcacaatgtccatcaagaaaagggccaagattgtggaaagattcaacagtccctctaac
ccagagttcatcttcatgctgagcagcaaggctggtggatgtggcctgaatctgattggt
gctaatcgcttggtgatgtttgatcctgactggaacccagccaacgatgagcaggcaatg
gcgcgggtgtggagagacggacagaagaagacctgctacatctacagactgctctctaca
gggacaatcgaggagaagatcctgcagaggcaggcccataagaaagctctgagcagctgt
gtggtagatgaggagcaggacgtggaacgtcacttctctctgggtgaactccgagaactc
ttcgctctcaacgaggagaccgccagcgacacacatgacaagtttcgctgtcagcgctgt
gtgaacggcagagaggttcggcctcctgcagaggactctgactgtaccagtgacctttct
cagtggaaccactgcttcagcaagaagggcttgagggaccaagtgttgaaggcctcctgg
gacgctgcggtctccttcgtcttccaccagcgctctcacgaggaccagagaggtgtacta
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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