KEGG   Lates calcarifer (barramundi perch): 108897307
Entry
108897307         CDS       T04895                                 
Name
(RefSeq) transcription factor COE3 isoform X1
  KO
K09103  early B-cell factor
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108897307
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    108897307
SSDB
Motif
Pfam: COE1_DBD COE1_HLH TIG
Other DBs
NCBI-GeneID: 108897307
NCBI-ProteinID: XP_018552386
Position
LG16_LG22:11060765..11130681
AA seq 582 aa
MFGIQETIPRGGTTMKEEPLGGLNSVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPTSEKTNNGIHYKLQLLYSNGVR
TEQDLYIRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHG
RRARRLDPSEGTPPYLENAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ
IPSLANTASHGMMGVNSFSSQLAVNVSESQGNDQVGYSRNTSSVSPRGYISSSTPQQSSY
NTVSNSMNGYGNAGMNLGVPSSPGFLNGSSANSPYGIKQKSAFAPVVRPQASPPPSCTSA
NGNGLQGEPPSPPHPFPTDYWSDTAAQASVRFAMSGLVVPPM
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgtttgggattcaggaaactataccgcggggtgggacgacgatgaaggaggaaccgctg
ggtggactgaactcggtccgctcctggatgcacacagctggggtggtggatgcaaacaca
gccgcccaaagcggtgtcggcttggcacgggcacattatgaaaagcagcccccttccaac
ctcagaaaatccaattttttccatttcgtcctggcgctgtatgacagacagggtcagccc
gtggagatcgaaaggacagcttttgtggactttgtggagaaagaaaaagaaccaaccagt
gaaaaaactaacaatgggatacattacaaactacagttattgtacagcaatggcgtcaga
acagaacaggatctttacatacggttaatcgattccatgacgaagcaggccatagtttat
gagggccaagacaagaatccagaaatgtgcagagttcttcttactcatgaaattatgtgc
agccgatgctgtgacaagaaaagctgtggaaacaggaacgagactccatcagaccctgtg
atcattgacagattcttcctaaagttctttctcaagtgcaatcagaactgtctgaagaat
gcagggaatccacgagacatgcgcagattccaggttgtcgtatcgacgaccgtcaacgtg
gatggccatgtcttggctgtctctgacaacatgttcgtacacaacaattccaagcatggg
cgaagggctcgcagactcgacccttcagaaggtacgcctccttatctggagaatgcagcc
accccgtgcatcaaggctatcagccccagcgagggatggaccactggaggagccactgtc
atcatcataggggacaacttctttgacggcctacaagtcgtgttcggcaccatgctcgta
tggagcgagctgataactccccacgccatccgtgtccagactccacctcggcacatcccc
ggtgttgtggaagtcacgctgtcctacaagtccaagcagttctgcaaaggtgcccccggg
agatttgtctatactgctctgaatgagccaaccatcgactatggtttccagaggctgcag
aaggtcatccccagacaccctggcgatcctgagaggttaccaaaggaggtgttactgaag
cgggcggccgatctcgttgaagccctgtatggaatgccccacaacaatcaggagatcatt
ctgaagagggcagctgacatcgccgaggccctgtacagcgttccccgcaaccacaaccag
atcccctctctcgctaacacagcctcccacggcatgatgggagtcaactccttcagcagc
cagctagcagtcaatgtctctgagtcacaagggaatgaccaagtgggctacagccggaac
accagcagcgtgtccccccggggctacatctccagcagcaccccgcagcagtcgagctac
aacaccgtcagcaacagcatgaatggctacggcaatgccggtatgaacctgggagtgcca
agctcccctgggttcctcaacggatcctctgccaactccccatatggaattaaacaaaag
agcgccttcgcccctgtggtccgaccccaggcctccccacccccctcctgcaccagcgcc
aacggcaacggactgcaaggtgagcccccctcaccccctcatcccttccctacggactac
tggtcagataccgctgctcaggcctctgtccggtttgccatgtccggcctggttgtccca
ccaatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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