KEGG   Lates calcarifer (barramundi perch): 108897948
Entry
108897948         CDS       T04895                                 
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
lcf04530  Tight junction
lcf04810  Regulation of actin cytoskeleton
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108897948 (zgc:86896)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108897948 (zgc:86896)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108897948 (zgc:86896)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108897948 (zgc:86896)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108897948 (zgc:86896)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108897948 (zgc:86896)
Membrane trafficking [BR:lcf04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    108897948 (zgc:86896)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     108897948 (zgc:86896)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 SH3_3 DUF2694
Other DBs
NCBI-GeneID: 108897948
NCBI-ProteinID: XP_018553274
UniProt: A0A4W6D473
Position
LG11:complement(21049500..21056922)
AA seq 356 aa
MSLYSFGLEPISCHAWNKDRTQIAVSPNNNKVNIYEKKGKDWVKIHELTEHSGRITGIDW
APESNRIVTCASDRNAYVWTLKDGMWKPTLVLVRINRAATCVKWSPQENKFALGSGARLI
SVCYFEKENDWWLSKHIKKPICSTVLSLAWHPNNILLAAGSADLHCRVFSAYIKDIEDKP
GPTAWGAKMPFGEVLLEHKDCGGWVHSVSFSPSGDQLAWVAHNSSITVADAAQKKEVTQL
TIDHLPLLSVLYVNPTEIVAAGHDCCPYQFTYKGPGALEFVKKLDIPKQTSKSSMSAMQH
FRNLDKRATEDDSNELDTLHQNSITQLCVVSGEKAKVEKYSSVGLDGAMVIWDFKH
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtcactctacagcttcggcctggagccgatctcctgccacgcctggaacaaagacagg
acccagattgcagtgagtccaaacaacaataaggtgaacatctatgagaagaaaggcaaa
gactgggtcaaaatccacgagctgactgagcacagtggacgaatcacaggtattgactgg
gccccagagtccaaccgcattgtgacatgtgcctcagaccgcaatgcctatgtgtggact
ctgaaggatggcatgtggaaacccaccctggtcctggttcgcatcaaccgtgcagcaaca
tgtgtgaagtggtcacctcaggagaacaagtttgccctgggcagcggagctcgtctcatc
tccgtctgctactttgagaaggagaatgactggtggctgagtaagcacatcaagaagccc
atttgttccacagtcctgagtctagcctggcatcccaacaacatcctactggcagctggg
tctgcagaccttcactgcagggttttctcggcctacatcaaagacatcgaggacaaacct
ggacccactgcctggggggccaagatgccttttggggaggtgctgctggagcacaaggac
tgtggaggctgggtgcacagtgtctccttctcccccagtggagaccagctggcatgggtg
gcccacaacagcagcatcactgtggctgatgctgcccagaagaaggaggtaacccaactg
accattgaccatctgccactgctgagcgtcctctatgtcaaccccactgagattgttgct
gcgggccatgactgttgtccataccagtttacctataagggtcctggtgccctggagttt
gtgaagaagctggacattcctaagcagacctctaagagcagcatgtcagccatgcaacac
ttccgcaacctggacaagagggccactgaggatgacagcaacgagctggacacccttcac
caaaacagcatcacgcagctgtgtgttgtgtcaggggagaaagccaaagtagagaagtac
agtagtgtgggtctggatggagccatggtgatctgggactttaagcattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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