KEGG   Lates calcarifer (barramundi perch): 108901708
Entry
108901708         CDS       T04895                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04137  Mitophagy - animal
lcf04144  Endocytosis
lcf04145  Phagosome
lcf04148  Efferocytosis
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108901708
   04145 Phagosome
    108901708
   04137 Mitophagy - animal
    108901708
   04148 Efferocytosis
    108901708
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108901708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108901708
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108901708
   04031 GTP-binding proteins [BR:lcf04031]
    108901708
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    108901708
 Endosome - Lysosome transport
    108901708
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108901708
  Exosomal proteins of other body fluids (saliva and urine)
   108901708
  Exosomal proteins of colorectal cancer cells
   108901708
  Exosomal proteins of bladder cancer cells
   108901708
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    108901708
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 108901708
NCBI-ProteinID: XP_018558833
UniProt: A0A4W6BLB8
Position
LG23:complement(10790958..10795421)
AA seq 220 aa
MAGRGGGSTRPNGAAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKEL
QRQASPNIVIALAGNKADIANKRAVELQEAQVYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNDAQGGAGQGGRTRTGVDLQEAAPQGRSGQCCGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggctgggcgcggtggaggatcaaccaggcctaatggtgccgcagcagcaaacaaaatc
tgccagttcaaactggtgctgctgggggagtcggcagtgggtaagtccagcttagtgctg
cgatttgtcaaaggccagttccatgaattccaggagagcaccattggagctgccttcctc
actcagaccgtctgtctggacgacacaactgtgaagtttgagatctgggacacagcaggt
caagagcgctaccacagcttggctccaatgtactacagaggagcgcaggcagccattgtg
gtctacgacatcaccaacacagatacatttgtacgggcaaaaaactgggtgaaggagctg
cagagacaagccagccccaacatagtgattgctctggcaggcaacaaggcagacatcgca
aacaagagagccgtggagcttcaggaggcgcaagtgtatgctgatgacaacagtctactc
ttcatggagacctcagctaagactgccatgaatgtcaacgaaattttcatggctattgca
aagaagctaccgaagaacgacgctcagggtggagcaggacaaggtggacggacccggaca
ggagtggatctacaagaagccgcccctcagggccgcagcggccagtgctgcggcggcaat
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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