KEGG T00681: Lcho

Leptothrix cholodnii: Lcho_0524

Entry

Lcho_0524 CDS T00681

Gene name

ddl

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

lch Leptothrix cholodnii

Pathway

lch00473	D-Alanine metabolism
lch00550	Peptidoglycan biosynthesis
lch01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:lch00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:lch00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 ATPgrasp_Ter GARS_A ATP-grasp CPSase_L_D2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

570652..571641

AA seq 329 aa
MSAVDVKALGRVAVLMGGSSAEREISLMSGAGVLQALLSQGVDAHAFDPAERELAELKHE
GYARCFIALHGRHGEDGTVQGALELLGIPYTGSGVMASAIAMDKVMTKRIWLAEGLPTPR
YVWLASDDQGAERVGRVSAELGLPLIVKPPREGSSIGVTKVVEAAQVGAAVALSAGYDAD
VLCEAFIEGEELTCPVLGEGAHAVALPVIRIVPPAAGYDYQNKYFTDEVQYLCPSGLSAE
LEREIQRITLASYRALGCRGWGRADLMLRAGDQQPFLLEMNTSPGMTGHSLVPMSARASG
ISYEALCLQLLAAARLDNPAPAPLSSAGG

NT seq 990 nt +upstreamnt +downstreamnt
atgagcgccgttgacgtcaaggcgctcggccgcgtcgccgtcctgatgggcggcagctcg
gccgagcgcgagatctcgctgatgagcggcgcgggcgtgctgcaggcgctgttgagccag
ggcgtcgacgcgcatgccttcgacccggccgagcgcgagctggccgagctcaagcacgaa
ggctacgcgcgctgcttcatcgcgctgcatggccgccacggcgaagacggcaccgtgcag
ggcgcgctcgaactgctcggcatcccgtacaccggctcgggcgtgatggcctcggcgatc
gcgatggacaaggtcatgaccaagcgcatctggctcgccgaaggcctgccgacgccgcgt
tacgtctggctcgccagcgacgaccagggcgccgagcgcgtcggccgtgtcagcgccgag
ctgggcctgccgctgatcgtcaagccgccgcgcgagggctcgtcgatcggcgtgaccaag
gtcgtcgaggcggcgcaggtgggcgctgcggtcgcgctgtcggccggctacgacgccgac
gtgctgtgcgaagccttcatcgagggcgaggagctgacctgcccggtgctgggcgaaggc
gcccatgccgtggcgctgccggtgatccgcatcgtgccgccggcggcgggttacgactac
cagaacaagtacttcaccgacgaggtgcagtacctctgcccgagcgggctgtcggccgag
ctggagcgcgagatccagcgcatcacgctggcgtcgtatcgcgcgctcggctgccgcggc
tggggtcgtgccgacctgatgctgcgtgcgggcgatcagcagcccttcctgctggagatg
aacacctcgccgggcatgaccggccactcgctggtgccgatgtccgcgcgtgcgtcgggc
atctcgtacgaggcgctgtgcctgcagctgctggccgccgcccggctcgacaatccggcg
ccggcgccgctgtcatcggccggcggctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-LCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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