KEGG   Leptothrix cholodnii: Lcho_1062
Entry
Lcho_1062         CDS       T00681                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lch  Leptothrix cholodnii
Pathway
lch03030  DNA replication
lch03410  Base excision repair
lch03420  Nucleotide excision repair
lch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lcho_1062
   03410 Base excision repair
    Lcho_1062
   03420 Nucleotide excision repair
    Lcho_1062
   03440 Homologous recombination
    Lcho_1062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lch03032]
    Lcho_1062
   03400 DNA repair and recombination proteins [BR:lch03400]
    Lcho_1062
Enzymes [BR:lch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lcho_1062
DNA replication proteins [BR:lch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Lcho_1062
DNA repair and recombination proteins [BR:lch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Lcho_1062
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Lcho_1062
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: ACB33331
UniProt: B1Y3T7
Position
1130970..1133774
AA seq 934 aa
MNPDRARPTLLLVDGSSYLYRAYHAMPDLRGPDGQPTGAIHGLVAMLKLLRSQIGAEHAA
CVFDAKGPTFRDDWYPLYKAQRPPMPDDLRLQIEPIHEVVRLLGWPVLEVPGIEADDVIG
TLAQLAEKSGHRVVISTGDKDLAQLVTEHVTLINTMSRESLDIEGVKAKFGVPPDRIVDY
LTLMGDTVDNVPGVEKVGPKTAAKWIAEHGSLDGVVAAAGSIKGVAGENLRRALDWLPTA
RKLVTVKTDCDLSGHVPAWPALEALALREVDPDGLRAFYMRNGFRTWTRELEAQAPSAPV
IASAAAPALDDMAQASGNGDAPAQAPAPAADGAAGRYETIFTTEQLDAWIARLQAAPLVA
IDTETDSLDPMRARIIGISFAVQPLEAAYVPVGHDYPGAPDQLPLDEVLARLRPWLEDAG
TRKVGQNIKYDSHVFANHGVTVRGYAHDTMLESYVLEAHKPHGLASLADRHLGRSGINYE
DLCGKGAGQIPFSHVAVDQASTYSGEDSEMTLQVHQTLWPQLEAEPRLRELYETIEMPSA
EVLVRIERNGVLIDAGVLARQSHQLAQRMHTLEQEAHAIAGQPFNMSSPKQIGEILFTKL
GLPVKKKTASGAPSTDEEVLQELAADYPLPARILEHRSLAKLKGTYTDKLPLMVNPSTGR
VHTNYAQAVAITGRLSSNDPNLQNIPIRTAEGRRVREAFVAAPGHKLVSADYSQIELRLM
AHISGDANLLKAFADGMDVHRATAAEVFNIAAADVTSEQRRYAKTINFGLIYGMGAFGLA
ASLGIEQKAARDYIERYFARYPDVKRYMDETKAGAAQLGHVETLFGRRIVLPEIKGGNGP
RKAAAERQAINAPMQGTAADLIKLAMIAVQKAIDDEGRASKMIMQVHDELVLEVPEAELG
WAREALPRLMAGVAQLKVPLVAEVGEGANWEEAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgaatccagaccgcgcccgccccaccctcctgctggtcgacggctccagctacctctac
cgcgcctaccacgcgatgcccgacctgcgcggccccgacggccagcccaccggtgccatc
cacggcctggtggccatgctcaagctgctgcgcagccagatcggcgccgaacacgcggcc
tgcgtcttcgacgccaagggcccgaccttccgcgacgactggtacccgctctacaaggcc
cagcgcccgccgatgcccgacgacctgcggctgcagatcgagccgatccacgaggtcgtc
cggctgctcggctggccggtgctcgaggtgcccggcatcgaggccgacgacgtcatcggc
acgctcgcccagctggccgaaaagtccggccaccgggtggtgatctccaccggcgacaag
gacctggcgcagctcgtcaccgagcacgtcacgctgatcaacaccatgagccgcgagtcg
ctcgacatcgagggcgtcaaggccaagttcggcgtgccgccggaccgcatcgtcgactac
ctgacgctgatgggcgacacggtcgacaacgtgcccggcgtcgagaaggtcggccccaag
accgccgccaagtggatcgccgaacacggctcgctcgacggcgtggtggccgccgccggc
tcgatcaagggcgtggccggcgagaacctgcgccgcgcgctcgactggctgccgaccgcg
cgcaagctcgtcaccgtcaagaccgactgcgacctgagcggccacgtgcccgcgtggccg
gcgctcgaggcgctggcgctgcgcgaggtcgatcccgacggcctgagggcgttctacatg
cgcaacggcttcaggacctggacccgcgagctggaggcgcaggccccgagcgcccccgtc
atcgcttctgccgcagcccccgcgctcgacgacatggcgcaggcctcgggcaacggcgat
gcgccggcccaggctccggcgccggccgccgatggtgcggcgggtcgctacgaaaccatc
ttcaccaccgagcagctcgatgcctggatcgcgcgactgcaggccgcgccgctggtggcg
atcgacaccgagaccgactcgctcgacccgatgcgtgcccgcatcatcggcatcagcttc
gcggtgcaaccgctggaggcggcctacgtgccggtcggccacgactaccccggcgcgccc
gaccagctgccgctcgacgaggtgctggcgcgcctgcgtccctggctcgaagacgccggc
acgcgcaaggtcggccagaacatcaagtacgacagccacgtcttcgccaaccacggcgtc
acggtgcgcggctacgcccacgacaccatgctcgaaagctacgtgctcgaagcccacaag
ccgcacggcctggccagcctggccgaccgccacctcggccgcagcggcatcaactacgaa
gacctgtgcggcaagggcgccggccagatcccgttcagccacgtggcggtcgaccaggcc
agcacctactcgggcgaagacagcgagatgacgctgcaggtgcaccagacgctgtggccg
cagctcgaagccgaaccgcgcctgcgcgagctctacgaaaccatcgagatgccgagcgcc
gaggtgctggtgcgcatcgagcgcaacggcgtgctgatcgacgcgggcgtgctggcgcgc
cagagccaccagctcgcgcagcgcatgcacacgctcgaacaggaggcccatgcgattgcc
ggccagcccttcaacatgagcagccccaagcagatcggcgagatcctgttcaccaagctc
ggcctgccggtcaagaagaagaccgccagcggcgcgcccagcaccgacgaggaagtgctg
caggaactcgccgccgactacccgctgccggcgcgcatcctcgaacaccgcagcctggcc
aagctcaagggcacctacaccgacaagctgccgctgatggtcaacccgtcgaccggccgc
gtgcacaccaattacgcgcaagccgtggcgatcaccgggcggctgtcgagcaacgatccg
aacctgcagaacatccccatccgcaccgccgagggccggcgcgtgcgcgaggccttcgtc
gccgcgcccggccacaagctggtcagcgccgactactcgcagatcgagctgcggctgatg
gcgcacatctcgggcgacgccaacctgctgaaggccttcgccgacggcatggacgtgcac
cgcgccaccgccgccgaggtcttcaacatcgccgccgccgacgtcaccagcgagcagcgc
cgctacgccaagaccatcaacttcggcctgatctacggcatgggcgcgttcggcctggcg
gccagcctgggcatcgagcagaaggcggcgcgtgactacatcgagcgctacttcgcgcgt
tacccggacgtcaaacgctacatggacgagaccaaggccggcgcggcgcagctcggtcat
gtcgagacgctgttcggccgccgcatcgtgctgcccgagatcaagggcggcaacggcccg
cgcaaggccgccgccgaacgccaggccatcaacgcgccgatgcagggcaccgcggccgac
ctgatcaagctggcgatgatcgcggtgcagaaggccatcgacgacgaaggccgcgccagc
aagatgatcatgcaggtgcacgacgaactggtgctcgaggtgcccgaggccgaactcggc
tgggcgcgtgaggcgctgccgcggctgatggccggcgtggcgcagctcaaggtgccgctg
gtggccgaggtgggcgaaggggccaattgggaggaagcccattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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