KEGG T00681: Lcho

Leptothrix cholodnii: Lcho_1647

Entry

Lcho_1647 CDS T00681

Definition

pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.61)

Orthology

K00627

pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]

Organism

lch Leptothrix cholodnii

Pathway

lch00010	Glycolysis / Gluconeogenesis
lch00020	Citrate cycle (TCA cycle)
lch00620	Pyruvate metabolism
lch01100	Metabolic pathways
lch01110	Biosynthesis of secondary metabolites
lch01120	Microbial metabolism in diverse environments

Module

lch_M00307

Pyruvate oxidation, pyruvate => acetyl-CoA

Class

Metabolism; Carbohydrate metabolism; Glycolysis / Gluconeogenesis [PATH:lch00010]
Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:lch00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:lch00620]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding Biotin_lipoyl_2 GCV_H HlyD RnfC_N HlyD_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1754941..1756605

AA seq 554 aa
MALIEVKVPDIGDFKDVAIIELLVKPGDTVKAEQSLLTVESDKASMEIPSSHAGVVKDLK
VALGDKINEGTVVLTLEVAGAAAPAPAPAAAAAVPAPAPAAPAAAPVAAPAAAAAGPIEI
FVPDIGDFDSVAVIELLVKPGDTVKAEQSLITVESDKASMEIPSSHAGVIKELKVKLGDK
VSKGSLVAIIEGAAGAAPAAAAPAPAAAAAPAAAPVAAAAAVVAAPAAASVPAHDPTVLN
LSLPHASPSIRKFARELGVPLAEVKGSGPKGRITEVDVQGFVKGVMAGTAQTAAQKAKAP
APAAAGGGEAFPGLLAWPKVDFAKFGPVERKDLSRIKKISGANLHRNWVIIPHVTNHDDA
DITDLEAFRVATNKENEKSGVKVTMLAFMIKAAVAALKKFPEFNASLDGDTLVLKNYFHI
GFAADTPNGLMVPVIKDADKKGIFQISTEMGELAKKARDGKLGPAEMSGGCFSISSLGGI
GGRYFTPIINAPEVAIMGVCKSAIEPKWDGKAFQPRLMLPLSLSWDHRVIDGAAAARFNV
YFASLLADFRRIVL

NT seq 1665 nt +upstreamnt +downstreamnt
atggcattgattgaagtgaaggtccccgacatcggggatttcaaggacgtcgcgatcatc
gaactgctggtcaagccgggtgacaccgtcaaggccgagcagagcctgctcaccgtcgag
agcgacaaggcctcgatggagatccccagctcgcacgccggcgtggtcaaggacctcaag
gtcgccctgggcgacaagatcaacgaaggcaccgtggtgctgacgctcgaggtggccggt
gccgccgcgccggctccggcacctgccgcagcggctgcggtgcctgcaccggccccggct
gctccggcggccgcgccggtggcggcacccgctgcggctgcggccggcccgatcgagatc
ttcgtgcccgacatcggtgatttcgactcggtcgcggtgatcgagctgctggtcaagccg
ggtgacaccgtcaaggccgagcagagcctgatcacggtcgagagcgacaaggcctcgatg
gagatcccgtcgtcgcatgccggcgtgatcaaggaactcaaggtcaagctcggcgacaag
gtcagcaagggttcgctggtcgcgatcatcgaaggcgcggccggtgccgcaccggctgcg
gctgccccggcgcctgccgctgctgccgcgcctgcagccgcacctgtcgctgcggcggct
gccgtggtggcagcgcctgccgcggccagcgtgccggcccacgatcccaccgtgctgaac
ctgtcgctgccgcacgcatcgcccagcatccgcaagttcgcccgcgaactgggcgtgccg
ctggccgaggtcaagggctccggccccaagggccgcatcaccgaggtcgacgtgcaaggc
ttcgtcaagggcgtgatggccggcaccgcgcagaccgcggcgcagaaggccaaggcgccc
gcaccggctgcggccggtggtggcgaggccttcccgggcctgctggcctggcccaaggtc
gatttcgccaagttcggcccggtcgagcgcaaggacctctcgcgcatcaagaagatctcg
ggcgccaacctgcaccgcaactgggtgatcattccgcacgtcacgaaccatgacgacgcg
gacatcaccgatctcgaagccttccgcgttgccaccaacaaggaaaacgagaagtccggc
gtcaaggtcacgatgctggccttcatgatcaaggcggcggtcgcggcgctgaagaagttc
cccgagttcaacgcctcgctcgacggcgacacgctggtgctcaagaactacttccacatc
ggcttcgcggccgatacgcccaacggcctgatggtcccggtgatcaaggatgccgacaag
aagggcatcttccagatcagcaccgagatgggcgagctggccaagaaggcccgcgacggc
aagctcggccccgccgagatgagcggcggctgcttcagcatcagctcgctcggcggcatc
ggcgggcgctatttcacgcccatcatcaatgcgccggaagtggccatcatgggcgtgtgc
aagagcgccatcgagcccaagtgggacggcaaggccttccagccgcgcctgatgctgccg
ctgtcgctgtcgtgggatcaccgcgtcatcgacggcgcggctgcggcccgcttcaacgtc
tacttcgcatcgctgctggcggacttccgccgcatcgtgctctga

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-LCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (29)   

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