KEGG   Leptothrix cholodnii: Lcho_1682Help
Entry
Lcho_1682         CDS       T00681                                 

Definition
tryptophan synthase subunit beta
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
lch  Leptothrix cholodnii
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:lch00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Lcho_1682
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Lcho_1682
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Lcho_1682
Enzymes [BR:lch01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Lcho_1682
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1794428..1795714
Genome map
AA seq 428 aa AA seqDB search
MFDYQQPDARGHFGIYGGSFVAETLSHALDELNAAYERYRHDPEFIAEFRNELAHFVGRP
SPVYHAARMSREVGGAQIYLKREDLNHTGAHKINNTIGQALLARRMGKPRVIAETGAGQH
GVATATICARYGMECVVYMGSEDVKRQSPNVYRMNLLGARVVPVESGSKTLKDALNEAMR
DWVTNVENTFYIIGTVAGPHPYPAMVRDFQRVIGDECLVQMPALAGRQPDAVVACVGGGS
NAMGIFYPYIPHEGVRLIGVEAAGEGMESGKHSASLQRGSPGVLHGNRTYVLQDANGQIT
ETHSVSAGLDYPGVGPEHAYLKDIGRAEYVGITDAEALQAFHYLCRAEGIIPALESSHAV
AYAMKLAKTMRPDQHVLVNLSGRGDKDIGTVADLSGADFYCRPSCRGQSVKGGDPSVVEI
QRKAGGVQ
NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt
atgttcgattaccagcaacccgatgcccgcgggcatttcgggatctacggcggcagcttt
gtcgccgaaaccctgagccacgcgctcgacgaactgaatgcggcctacgagcgttaccgc
cacgaccccgagttcatcgccgaattccgcaacgaactggcgcatttcgtcggccgcccg
agcccggtctatcacgccgcacgcatgagccgtgaagtgggcggcgcgcagatctacctc
aagcgcgaggatctcaaccacaccggcgcgcacaagatcaacaacaccatcggccaggcg
ctgctcgcccggcgcatgggcaagccgcgcgtgatcgccgagaccggtgccggccagcat
ggcgtggccaccgccaccatctgcgcgcgctacggcatggaatgcgtggtctacatgggc
agcgaggacgtcaagcgccagagccccaacgtctaccgcatgaacctgctgggcgcgcgc
gtggtgccggtcgagtcgggcagcaagacgctcaaggatgcgctcaacgaggcgatgcgc
gactgggtcaccaacgtcgagaacaccttctacatcatcggcacggtggcggggccgcac
ccgtatccggcgatggtgcgcgacttccagcgcgtgatcggcgacgaatgcctggtgcag
atgcccgccctcgcgggccgtcaacccgatgcggtggtggcctgtgtcggtggcggcagc
aacgcgatgggcatcttctatccctacatcccgcatgaaggcgtgcgcctgatcggtgtc
gaggcggcgggcgagggcatggaaagcggcaagcattcggcctccttgcaacgcggctcc
cccggcgtgctgcacggcaaccgcacctatgtgctgcaggacgccaacggccagatcacc
gagacgcactcggtgtcggccggtctcgactaccccggcgtcggccccgagcacgcctac
ctgaaggacatcggccgtgccgaatacgtcggcatcaccgatgccgaggcgctgcaggcc
ttccattacctgtgccgcgccgagggcatcatcccggcactcgaatccagccacgcggtt
gcctacgcgatgaaactggccaagaccatgcgcccggaccagcacgtcctcgtcaatctg
tcgggccgtggcgacaaggacatcggcacggtggccgacctgtcgggcgccgatttctac
tgccggccgtcgtgccgcggccagagcgtgaagggcggcgatccgtccgtggtcgagatc
cagcgcaaggccgggggtgtgcaatga

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