KEGG T00681: Lcho

Leptothrix cholodnii: Lcho_1682

Entry

Lcho_1682 CDS T00681

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

lch Leptothrix cholodnii

Pathway

lch00260	Glycine, serine and threonine metabolism
lch00400	Phenylalanine, tyrosine and tryptophan biosynthesis
lch01100	Metabolic pathways
lch01110	Biosynthesis of secondary metabolites
lch01230	Biosynthesis of amino acids

Module

lch_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:lch00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lch00400]

SSDB

Motif

Pfam:

PALP THUMP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1794428..1795714

AA seq 428 aa
MFDYQQPDARGHFGIYGGSFVAETLSHALDELNAAYERYRHDPEFIAEFRNELAHFVGRP
SPVYHAARMSREVGGAQIYLKREDLNHTGAHKINNTIGQALLARRMGKPRVIAETGAGQH
GVATATICARYGMECVVYMGSEDVKRQSPNVYRMNLLGARVVPVESGSKTLKDALNEAMR
DWVTNVENTFYIIGTVAGPHPYPAMVRDFQRVIGDECLVQMPALAGRQPDAVVACVGGGS
NAMGIFYPYIPHEGVRLIGVEAAGEGMESGKHSASLQRGSPGVLHGNRTYVLQDANGQIT
ETHSVSAGLDYPGVGPEHAYLKDIGRAEYVGITDAEALQAFHYLCRAEGIIPALESSHAV
AYAMKLAKTMRPDQHVLVNLSGRGDKDIGTVADLSGADFYCRPSCRGQSVKGGDPSVVEI
QRKAGGVQ

NT seq 1287 nt +upstreamnt +downstreamnt
atgttcgattaccagcaacccgatgcccgcgggcatttcgggatctacggcggcagcttt
gtcgccgaaaccctgagccacgcgctcgacgaactgaatgcggcctacgagcgttaccgc
cacgaccccgagttcatcgccgaattccgcaacgaactggcgcatttcgtcggccgcccg
agcccggtctatcacgccgcacgcatgagccgtgaagtgggcggcgcgcagatctacctc
aagcgcgaggatctcaaccacaccggcgcgcacaagatcaacaacaccatcggccaggcg
ctgctcgcccggcgcatgggcaagccgcgcgtgatcgccgagaccggtgccggccagcat
ggcgtggccaccgccaccatctgcgcgcgctacggcatggaatgcgtggtctacatgggc
agcgaggacgtcaagcgccagagccccaacgtctaccgcatgaacctgctgggcgcgcgc
gtggtgccggtcgagtcgggcagcaagacgctcaaggatgcgctcaacgaggcgatgcgc
gactgggtcaccaacgtcgagaacaccttctacatcatcggcacggtggcggggccgcac
ccgtatccggcgatggtgcgcgacttccagcgcgtgatcggcgacgaatgcctggtgcag
atgcccgccctcgcgggccgtcaacccgatgcggtggtggcctgtgtcggtggcggcagc
aacgcgatgggcatcttctatccctacatcccgcatgaaggcgtgcgcctgatcggtgtc
gaggcggcgggcgagggcatggaaagcggcaagcattcggcctccttgcaacgcggctcc
cccggcgtgctgcacggcaaccgcacctatgtgctgcaggacgccaacggccagatcacc
gagacgcactcggtgtcggccggtctcgactaccccggcgtcggccccgagcacgcctac
ctgaaggacatcggccgtgccgaatacgtcggcatcaccgatgccgaggcgctgcaggcc
ttccattacctgtgccgcgccgagggcatcatcccggcactcgaatccagccacgcggtt
gcctacgcgatgaaactggccaagaccatgcgcccggaccagcacgtcctcgtcaatctg
tcgggccgtggcgacaaggacatcggcacggtggccgacctgtcgggcgccgatttctac
tgccggccgtcgtgccgcggccagagcgtgaagggcggcgatccgtccgtggtcgagatc
cagcgcaaggccgggggtgtgcaatga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-LCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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