KEGG   Leptothrix cholodnii: Lcho_1683Help
Entry
Lcho_1683         CDS       T00681                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha (EC:4.2.1.20)
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
lch  Leptothrix cholodnii
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:lch00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Lcho_1683 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Lcho_1683 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Lcho_1683 (trpA)
Enzymes [BR:lch01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Lcho_1683 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1795711..1796526
Genome map
AA seq 271 aa AA seqDB search
MSRIAATFARLAGQGRKALIPYVTAGDPFADITVDLMHAMAKAGADVIELGVPFSDPMAD
GPVIQRASERALSRNISTADVLAMVARFRETDDTTPVVLMGYANPVERYGPDRFVDDARA
AGVDGVLVVDYPPQECEAFADRLRAADLDPIFLLAPTSTDARMADVGRIATGYVYYVSLK
GVTGSGNLDTDAVARMIPRIRSHVSVPVGVGFGIRDAATAVAVARVSDAVVIGSRIIQLI
ENEPRERVVPVAAGFIAEIRTALDTLQGTHA
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgagccgcatcgccgccaccttcgcgcgcctggccgggcagggccgcaaggcgctgatt
ccgtatgtgactgccggcgatccgtttgccgacatcacggtcgatctgatgcacgccatg
gccaaggcgggtgccgacgtgatcgaactgggcgtgccgttttcggatccgatggccgat
ggcccggtgatccagcgcgccagtgaacgcgcactctcgcgcaacatctccaccgccgac
gtgctggcgatggtggcgcggttccgcgaaaccgacgacaccacgccggtggtgctgatg
ggctacgccaacccggtcgagcgttacggcccggatcggttcgtcgacgatgcgcgtgcg
gccggtgtcgacggcgtgctggtggtcgactacccgccgcaggagtgcgaggcgttcgcc
gatcgcctgcgtgcggccgatctcgacccgatcttcctgctggcgccgacctcgaccgat
gcccgcatggccgacgtcggccgcatcgccaccggctacgtgtactacgtgtcgctcaag
ggcgtgaccggctcgggcaacctcgacaccgacgcggtggcccgcatgatcccgcgcatc
cgcagccatgtgagcgtgccggtcggcgtgggattcggcatccgcgacgcggcgacggcc
gtggcggtggcccgggtatcggacgccgtggtgatcggttcccgtatcattcaactgatc
gaaaacgagccgcgtgagcgggtggtaccggtggctgccggtttcatcgccgaaattcgc
acggccctcgacaccctgcaaggaacacacgcatga

DBGET integrated database retrieval system