KEGG   Leptothrix cholodnii: Lcho_2767
Entry
Lcho_2767         CDS       T00681                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lch  Leptothrix cholodnii
Pathway
lch03420  Nucleotide excision repair
lch03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Lcho_2767
   03430 Mismatch repair
    Lcho_2767
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lch03400]
    Lcho_2767
Enzymes [BR:lch01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Lcho_2767
DNA repair and recombination proteins [BR:lch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Lcho_2767
   MMR (mismatch excision repair)
    Other MMR factors
     Lcho_2767
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: ACB35032
UniProt: B1XWN1
Position
3049400..3051946
AA seq 848 aa
MSALPPSPPLPDSGHPAFADIGFDEPDRRDETHDPHEPPARPALPAGLLANLNPEQYAAV
TLAAEPALILAGAGSGKTRVLTTRIAWLLQTGQIGPGGLMAVTFTNKAAKEMVHRLSTML
PYNVRGMWIGTFHGLCNRFLRAHWKMAGLPQSFQILDSGDTLSAVKRVIKAMKLDEERFV
PKQVSWFIASSKDDGKRPKDLPTDDGQARTMVEIYQAYEDQCQREGVVDFAELMLRSYEL
MRDHPEIREHYQRRFRHILVDEFQDTNRLQYLWLKMFAGTPGALAGREPAAVFAVGDDDQ
SIYAFRGAQVGNMSDFEREYRVRQVIKLERNYRSFGNILDSANALIAHNSRRLGKNLRTE
AGPGEPVRIFESTSDFAEAQWLLEELQQLHRGGMARSETAILYRSNAQSRVIESALFNAG
MPYRVYGGLRFFERAEIKHALAYLRLTENPNDDTSFLRVVNFPARGIGARSVELLQDAAR
ASGRSLYQSVGALGGAAGTKLAGFTALVDRLRDATRGLTLREIIERMLDASGLINFYRTE
KEGQDRIENLEELVNAAEAFVTIEGFGKDAVALPVDETAPGTIAAPLPGEPEAVAAVDLL
PDAETGEILSPLAAFLTHAALEAGDNQAQAGQDAVQLMTVHSAKGLEFDAVFITGLEEGL
FPHENSLNSISAGGNEGLEEERRLMYVAITRARQRLYISFSQTRMLHGQTRYNVKSRFFD
ELPEAALKWITPKQQGFGSGYAQQYQQAWQRGSGPGGMVGAGRNSGWQPAPAAPPSWAAP
VPAAMRQSAAKDNGHGLRQGQGVFHTKFGEGVVLTLEGVGADARAQVNFGRHGTKWLALA
IAKLTPIE
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgtcagccctgcctccctcgccccccctgcccgattccggccatcccgcctttgccgac
atcggcttcgacgagcccgaccggcgggatgaaacacacgacccgcacgagccgccggcg
cggcctgcgctgcccgcgggcctgctcgccaacctcaacccggagcagtacgccgccgtc
acgctggcggccgagccggcgctgatcctggccggcgccggctcgggcaagacccgcgtg
ctgaccacccgcatcgcctggctgctgcagaccggccagatcggccccggcggcctgatg
gcggtcaccttcaccaacaaggccgccaaggagatggtgcaccgcctctcgacgatgctg
ccttacaacgtgcgcggcatgtggatcggcaccttccacggcctgtgcaaccgcttcctg
cgcgcgcactggaaaatggccggcctgccgcagagcttccagatcctcgactcgggcgac
acgctgagcgcggtcaagcgcgtcatcaaggccatgaagctcgacgaggaacgcttcgtg
cccaagcaggtgagctggttcatcgcgtccagcaaggacgacggcaagcgcccgaaagac
ctgcccaccgacgacggccaggcgcgcacgatggtcgagatctaccaggcctacgaggac
cagtgccagcgcgagggcgtggtcgatttcgccgagctgatgctgcgcagctacgagctg
atgcgcgaccacccggagatccgcgagcactaccagcggcgcttccgccacatcctggtc
gacgaatttcaagacaccaaccggctgcagtacctgtggctgaagatgttcgccggcacg
cccggcgcgctcgccgggcgcgagccggcggcggtgttcgcggtcggtgacgacgaccag
agcatctacgccttccgtggcgcgcaggtcggcaacatgagcgacttcgagcgcgagtac
cgcgtcaggcaggtcatcaagctggagcgcaactaccgctcgttcggcaacatcctcgac
tcggccaacgcgctgatcgcccacaacagccgccgcctgggcaagaacctgcgcaccgag
gccgggcccggcgagccggtgcggatcttcgagtcgaccagcgatttcgccgaggcacag
tggctgctcgaagaactgcagcaactgcaccgcggcggcatggcgcgcagcgaaaccgcg
atcctctaccgcagcaacgcgcagtcgcgcgtgatcgagtcggcgctgttcaacgccggc
atgccctaccgcgtctacggcggcctgcgcttcttcgagcgcgcggagatcaagcacgcg
ctggcctacctgcgcctgaccgagaacccgaacgacgacaccagcttcctgcgtgtcgtc
aacttcccggcccgcggcatcggcgcacgcagcgtcgagctgctgcaggacgcggcccgc
gccagcggccgcagcctctatcaaagcgtgggcgcactcggcggcgcggccggcaccaag
ctggcgggcttcaccgcgctggtcgaccggctgcgtgacgccacccgcggcctgacgctg
cgcgagatcatcgaacgcatgctcgacgccagcggcctgatcaacttctaccgcaccgag
aaggaaggccaggaccgcatcgagaacctggaggaactcgtcaacgcggccgaggccttc
gtgacgatcgagggtttcggcaaggacgcggtggcgctgccggtcgacgagaccgcgccc
ggcaccatcgccgcgcccctgcccggcgagcccgaggcggtggccgcggtcgacctgctg
cccgacgccgaaaccggcgagatcctgtcgccgctggcggcctttttgacccacgccgcg
ctcgaagcaggcgacaaccaggcccaggccggccaggacgccgtgcagctgatgacggtg
cactcggccaagggcctggagttcgacgcggtcttcatcaccgggctcgaagaaggcctg
ttcccgcacgagaactcgctcaacagcatcagcgccggcggcaacgaaggcctcgaagaa
gagcgccggctgatgtacgtggcgatcacgcgggcgcggcagcggctgtacatcagcttc
agccagacccgcatgctgcacggccagacgcgctacaacgtcaagagccgcttcttcgac
gagctgcccgaggcggcgctgaagtggatcacgcccaagcagcagggtttcggctcgggt
tacgcgcagcaataccagcaggcctggcagcgcggctcgggccccggcggcatggtcggc
gccgggcgcaacagcggctggcaaccggccccggcggcgccgccgtcatgggccgcgccg
gtgcccgcggcgatgcgccagagcgcggccaaggacaacggccacggcctgcgccagggc
cagggcgtgttccacaccaagttcggcgagggcgtggtgctgacgctcgaaggtgtcggc
gcggacgcccgcgcccaggtcaacttcggccgccacggcaccaagtggctggcactcgcg
atcgccaagctgacgccgatcgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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