KEGG T00681: Lcho

Leptothrix cholodnii: Lcho_2884

Entry

Lcho_2884 CDS T00681

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

lch Leptothrix cholodnii

Pathway

lch00020	Citrate cycle (TCA cycle)
lch00310	Lysine degradation
lch00380	Tryptophan metabolism
lch01100	Metabolic pathways
lch01110	Biosynthesis of secondary metabolites
lch01120	Microbial metabolism in diverse environments

Module

lch_M00009	Citrate cycle (TCA cycle, Krebs cycle)
lch_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:lch00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:lch00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:lch00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3174696..3177548)

AA seq 950 aa
MMQQYRTNSYLFGGNAPYVEEMYEAYLDNPGSVPDNWRAYFDALQHVPATDGTDSRDVAH
APVIESFAQRAKSNAFAVKASSTDLAVARKQVHVQSLIAAYRNVGARWADLDPLKRQERP
KIPELEPAFYDLTESDMDITFSATNTYFGKADMSLRQILQALRETYCSTLGAEFMHITDQ
TQKRWWQERLESIRAKPTFNVEQKKHILDRLTAAEGLERFLHTKYVGQKRFSLEGGESFI
AAMDELVQRAGEKGVQEIVIGMAHRGRLNVLVNTLGKMPKDLFAEFDHTAPEDLPAGDVK
YHQGFSSDISTPGGPVHLSLAFNPSHLEIVNPVVEGSVRARQDRRGDTIGAQVLPVLVHG
DSAFGGQGVNQETLALSETRGYSTGGTVHLIINNQIGFTTSDPRDLRSTLYCTDIVKMID
APVLHVNGDDPEAVVLATQLALEFRMAFRKDVVIDVICFRKLGHNEQDTPALTQPLMYKK
ISAHPGTRRLYADKLAAQGLGETIGDDMSKAYRAAMDEGRHTVDPVISNFKSKYAVDWVP
FLGKKWTDAADTAIPLTEWKRLAERLTTIPASVSPHPLVKKVFDDRAAMGRGEINVDWGM
GEHMAFASLVAAGYPVRLSGEDCGRGTFTHRHAVIHDQKREKWDEGTYIPLQHVGDNQAG
FTVIDSILSEEAVLGFEYGYAAAEPNTLTIWEAQFGDFANGAQVVIDQFIASGEVKWGRV
NGLTLMLPHGYEGQGPEHSSARLERFMQLAADTNMQIVQPTTASQIFHVLRRQMVRQFRK
PLVIMTPKSLLRNKDATSTLVEFTKGEFRTVIGELNTGIDAAKVKRVIACSGKVYYDLVK
KRDEKKSNDVAIIRVEQLYPFPHKAFANELKKYPNANDIVWCQDEPQNQGAWFFVQHYIH
ENMQDGQKLGYAGRPASASPAVGYAHLHQEQQKALLDQAFGKLKGFVLTK

NT seq 2853 nt +upstreamnt +downstreamnt
atgatgcagcaatacaggacgaactcgtacctgttcgggggcaacgccccttacgtggaa
gagatgtacgaggcttacctcgacaacccaggctccgttccggacaactggcgcgcctac
ttcgacgcactccagcacgttcccgccaccgacggcaccgacagccgtgacgtggctcac
gcccccgtcatcgaatcgttcgcccagcgcgccaagtcgaatgccttcgccgtcaaggcc
agctcgaccgatctcgccgtcgcgcgcaagcaggttcacgtccagtcgctgatcgcggcc
taccgcaacgtcggtgcccgctgggccgatctcgacccgctcaagcgccaggagcgtccg
aagatccccgaactcgagccggcgttctacgacctgaccgagtccgacatggacatcacg
ttcagcgcgacgaacacctatttcggcaaggcggacatgtcgctgcgccagatcctgcag
gctctgcgcgagacctactgcagcacgctcggcgccgagttcatgcacatcaccgaccag
acgcagaagcgctggtggcaagagcggctcgagagcatccgtgccaagccgaccttcaat
gtcgagcagaagaagcacatcctcgaccgcctgaccgcggccgaaggcctggagcgcttc
ctccacaccaagtacgtcggccagaagcgcttctcgctcgaaggtggcgaaagcttcatc
gccgcgatggacgagctggtgcagcgtgccggcgagaagggcgtgcaggagatcgtcatc
ggcatggcccaccgcggccgcctgaacgtgctcgtcaacaccctgggcaagatgcccaag
gacctgttcgccgaattcgaccacaccgcgcccgaagacctgccggccggcgacgtcaag
taccaccagggcttcagctccgacatctcgaccccgggcggcccggtccacctgtcgctg
gccttcaacccctcgcacctggaaatcgtcaacccggtcgtcgaaggctcggtgcgtgcg
cgccaggaccgtcgcggcgataccatcggcgcccaggtgctgccggtgctggtgcacggc
gactcggccttcggtggccagggcgtcaaccaggaaaccctggcgctgtccgagacgcgt
ggttattccaccggcggcacggtgcacctgatcatcaacaaccagatcggcttcaccacc
agcgacccgcgcgacctgcgctcgacgctgtactgcaccgacatcgtcaagatgatcgat
gccccggtgctgcacgtgaacggtgacgatccggaagccgtcgtgctggccacccagctg
gcgctcgagttccgcatggccttccgcaaggacgtggtcatcgacgtcatctgcttccgc
aagctcggccacaacgagcaggacacgccggcgctgacccagccgctgatgtacaagaag
atcagtgcccaccccggcacccgtcgcctgtacgccgacaagctggccgcccagggtctg
ggcgagaccatcggcgacgacatgtccaaggcctatcgcgccgcgatggacgaaggccgt
cacacggtcgatccggtcatcagcaacttcaagagcaagtacgcggtcgactgggttccg
ttcctgggcaagaagtggaccgacgcggccgacaccgcgattccgctgaccgagtggaag
cgtctggccgagcgcctgaccaccattcccgccagcgtcagcccgcacccgctggtcaag
aaggtcttcgacgaccgcgccgcgatgggccgtggcgagatcaacgtcgactggggcatg
ggcgagcacatggcgtttgcctcgctggtggctgccgggtatccggtgcgcctgtcgggc
gaggactgcggccgtggcaccttcacgcaccgccatgccgtgatccatgatcagaagcgc
gagaagtgggacgaaggcacctacatcccgctgcagcacgtcggcgacaaccaggccggt
ttcaccgtcatcgactcgatcctgtcggaagaggcggtgctgggcttcgaatacggctac
gccgccgccgaacccaacacgctgacgatctgggaagcgcagttcggcgacttcgccaac
ggcgcgcaggtcgtgatcgaccagttcatcgcctcgggcgaagtcaagtggggccgcgtc
aacggcctgacgctgatgctgccgcacggctacgaaggccagggccccgagcacagctcg
gcacgcctggagcgcttcatgcagctggccgccgacaccaacatgcagatcgtgcagccg
accacggccagccagatcttccatgtgctgcgtcgccagatggtgcgccagttccgcaag
ccgctggtcatcatgacgccgaagtcgctgctgcgtaacaaggacgccacctcgacgctg
gtcgagttcaccaagggcgagttccgcaccgtcatcggcgagctcaataccggcatcgac
gcagccaaggtcaagcgcgtgatcgcctgttcgggcaaggtctattacgacctggtcaag
aagcgcgacgagaagaagagcaacgacgtggcgatcatccgcgtcgagcagctctatccc
ttcccgcacaaggccttcgccaacgagctcaagaagtacccgaacgcgaacgacatcgtg
tggtgccaggacgagccgcagaaccagggtgcctggttcttcgtgcagcactacatccac
gagaacatgcaggacggccagaagctcggctacgccggtcgccccgcatcggcttcgccg
gccgtgggttacgcccacctgcaccaggaacagcagaaggctctgctcgaccaggcattc
ggcaagctcaagggcttcgtcctgaccaagtga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-LCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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