KEGG T00681: Lcho

Leptothrix cholodnii: Lcho_3246

Entry

Lcho_3246 CDS T00681

Definition

glycoside hydrolase clan GH-D

Orthology

K07407

alpha-galactosidase [EC:3.2.1.22]

Organism

lch Leptothrix cholodnii

Pathway

lch00052	Galactose metabolism
lch00561	Glycerolipid metabolism

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:lch00052]
Metabolism; Lipid metabolism; Glycerolipid metabolism [PATH:lch00561]
Metabolism; Lipid metabolism; Sphingolipid metabolism

SSDB

Motif

Pfam:

Melibiase Glyco_hydro_31

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3601416..3603602

AA seq 728 aa
MNTRTHSASLPDSPAQFIALHGRASSIVIEAHADEAPIWRYWGPRLPDAATPGAALRDSR
PLPSFMLDFDQPLTVAPTFGVGWFGQSALLAHRDGLDFAQAYTRCEIEWLAPGSAVCLHL
HDDVARLRLDLTLKLDAASDVLTLQSTLHNLGDSAIDVQWLASGTLPLPGHSQQVRSYAG
QHVHEFLLQTDPLTRSLWRKESRRGRTSHDCFPGAVVTTPGATDDAGLVFGAHLAWSGNH
QQTIEWLHDGQYQWQMGEWLAPGEGRLAPGQALHTPEIVASCSTAGLNGLAANFHAELRS
RLNWPGGAMRARPVHLNTWEGFYFDVHPGPVKELATAAAAVGIERFVLDDGWFHGRHHDR
AALGDWWPDESKFPAGLGELIGHVNGLGMSFGLWVEPEMVNPDSELFRAHPDWALQVAGR
PLLTARNQLVLDISRPEAADYLFDKISALLAAHPIDYLKWDHNRDLAPAGLANGAPGYRA
QVHAVYALMARLRAAHPQVEIESCSGGGGRIDFAVLRHTHRVWTSDCIDALSRVAIQRGF
LQFFPPEIMGSHVGTAPSHTTGRTQNMAFRAAVALPGHLGVELDVRHLNEAETTELRAWI
ALYKQLRDRLHTGRVWLGEVADGIAWQAHGNAAAGDVLLLVYRTAPSSHRYTPVLRLTML
DAGARYRVHEVLPDGTVRATGHHNTAPFFDAINTPEGLTLDGAWLAHAGLPLPRAQAETA
FIVRLQKV

NT seq 2187 nt +upstreamnt +downstreamnt
atgaacacccgcacccactccgcatccctgcctgacagccccgcgcagttcatcgcgctg
cacggccgcgccagcagcatcgtcatcgaagcccatgccgacgaggcgccgatctggcgc
tactggggcccgcgcctgcccgatgcggcgacacccggcgcggccttgcgcgacagccgg
ccgctgccgtccttcatgctcgatttcgaccagccgctgacggtggcaccgaccttcggc
gtcggctggttcggccagagcgcgctgctggcgcaccgcgacgggctcgacttcgcgcag
gcgtacacgcgctgcgagatcgaatggctggcgcccggctcggccgtctgtctgcacctg
cacgacgacgtcgcccgcctgcgcctggacctcacgctcaagctcgacgcggccagcgac
gtgctcacgctgcagagcacgctgcacaacctgggcgacagcgcgatcgacgtgcaatgg
ctcgcctcgggcacgctgccgctgcccggccacagccagcaggtgcgctcctacgccggc
cagcacgtgcatgaattcctgctgcagaccgatccgctgacgcgcagcctgtggcgcaag
gaaagccggcgcggccgcaccagccacgactgctttcccggtgcggtggtgaccacgccc
ggcgccaccgacgacgccggcctggtgttcggcgcgcacctcgcgtggtcgggcaaccac
cagcagaccatcgagtggctgcacgacggccaataccagtggcagatgggcgagtggctg
gcacccggcgaaggccggctcgcaccgggccaggcgctgcacacgcccgagatcgtggcg
agctgctcgaccgccggcctgaacggcctggccgccaacttccacgccgagctgcgctcg
cgcctgaactggccgggcggcgcgatgcgcgcgcggccggtgcacctcaacacctgggaa
ggcttctacttcgacgtccaccccggcccggtcaaggaactcgccaccgccgccgcggcc
gtgggcatcgagcgcttcgtgctcgacgacggctggttccacggtcgccaccacgaccgc
gccgcgctcggcgactggtggcccgacgagagcaagttccccgccggcctgggcgagctg
atcggccacgtcaacggcctcggcatgagcttcggcctgtgggtcgagcccgagatggtc
aaccccgacagcgagctgttccgcgcccacccggactgggcgctgcaggtcgccggccgg
ccgctgctgaccgcgcgcaaccagttggtgctcgacatctcgcgccccgaggcggccgac
tacctgttcgacaagatctccgcgctgctggccgcgcacccgatcgactacctgaagtgg
gaccacaaccgcgacctcgcaccggccggcctggccaacggcgcgcccggttatcgggcc
caggtgcatgcggtctacgcgctgatggcgcggctgcgcgcggcccatccgcaggtcgag
atcgagagctgctcgggcggcggcgggcgcatcgatttcgcggtgctgcgccacacccat
cgggtctggaccagcgactgcatcgatgccctctcgcgggtggcgatccagcgcggcttt
ctgcagttcttcccgcccgagatcatgggctcgcacgtcggcaccgcgccctcgcacacc
accgggcgcacgcagaacatggccttccgcgccgcggtggcgctgcccggccacttgggc
gtcgagctcgacgtgcggcacctgaacgaggccgagaccaccgagctgcgcgcctggatc
gcgctctacaagcagctgcgcgatcgcctgcacacgggccgggtctggctgggcgaggtg
gccgacggcatcgcctggcaggcccatggcaacgcggccgcgggcgacgtgctgctgctg
gtctaccgcacggcgccgagctcgcaccgctacacgccggtgctgcgcctgaccatgctc
gacgccggcgcgcgctaccgcgtgcacgaggtgctgcccgacggcaccgttcgcgccacc
ggccaccacaacaccgcgccgttcttcgatgccatcaacacgcccgaaggcctgacgctc
gacggcgcctggctcgcccacgccggcctgccgctgccgcgtgcgcaggccgagaccgcg
ttcatcgtgcggctgcagaaggtctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (20)   
   KEGG COMPOUND (20)   
Chemical reaction (13)   
   KEGG ENZYME (1)   
   KEGG REACTION (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-LCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (45)   

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