KEGG T00681: Lcho

Leptothrix cholodnii: Lcho_3395

Entry

Lcho_3395 CDS T00681

Gene name

gltD

Definition

glutamate synthase subunit beta

Orthology

K00266

glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]

Organism

lch Leptothrix cholodnii

Pathway

lch00250	Alanine, aspartate and glutamate metabolism
lch00910	Nitrogen metabolism
lch01100	Metabolic pathways
lch01110	Biosynthesis of secondary metabolites
lch01120	Microbial metabolism in diverse environments
lch01230	Biosynthesis of amino acids

Class

Metabolism; Energy metabolism; Nitrogen metabolism [PATH:lch00910]
Metabolism; Amino acid metabolism; Alanine, aspartate and glutamate metabolism [PATH:lch00250]

SSDB

Motif

Pfam:

Fer4_20 Pyr_redox_2 Pyr_redox_3 NAD_binding_8 Pyr_redox Amino_oxidase FAD_oxidored HI0933_like GIDA DAO FAD_binding_2 Thi4 FMO-like NAD_binding_7 FAD_binding_3 Lycopene_cycl AlaDh_PNT_C NAD_Gly3P_dh_N 3HCDH_N NAD_binding_9 Trp_halogenase TrkA_N UDPG_MGDP_dh_N ApbA F420_oxidored NAD_binding_2 NAD_binding_10 ThiF Fer4_9

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3772242..3773717)

AA seq 491 aa
MGKVTGFLEYERLEEGYEPVEKRVKNYKEFVIGLKADDSKVQAARCMDCGTPFCNNGCPV
NNIIPDFNDLVYRGDWQNAITILHSTNNFPEFTGRICPAPCEAACTLNVNDDAVGIKSIE
HAIIDRAWEEGWVVPQPPKVKTGKKIAVVGSGPAGMAAAQQLARAGHAVTLFEKNDRVGG
LLRYGIPDFKMEKTHIDRRVKQMEAEGVVFRTGVLVGEWPKDGPASKVTNWAKESISADQ
LKAEFDAVLLTGGSEQSRDLPVPGRDLDGIHFAMEFLPQQNKLNAGDKLKGQLRADGKNV
IVIGGGDTGSDCVGTSNRHGAVSVTQFEVMPQPPVEENRPLTWPYWPLKLRTSSSHEEGC
SREFAISTKEFIGEKGRVTGLKTVHVEFKDGKLVDIPGTEKEYKADLVLLAMGFVNPVAT
VLDAFGVEKDGRGNAKAGVDEVGGYKTNVAKVFVAGDMRRGQSLVVWAIREGRQAARAVD
EFLMGATTLPR

NT seq 1476 nt +upstreamnt +downstreamnt
atgggcaaggtcactggttttctcgaatacgagcggctcgaagagggctacgagccggtc
gagaaacgcgtcaagaactacaaggaattcgtcatcggcctgaaggctgacgattccaag
gtgcaggctgcgcgctgcatggactgcggcacgccgttctgcaacaacggctgcccggtc
aacaacatcatcccggacttcaacgatctggtgtatcgcggcgactggcaaaacgccatc
accatcctgcacagcaccaacaacttccccgagttcaccggccgcatctgcccggcaccc
tgcgaagcggcttgcacgctcaacgtcaacgacgacgcggtgggcatcaagtcgatcgag
cacgcgatcatcgaccgcgcctgggaagagggctgggtcgtgccgcagccgcccaaggtc
aagaccggcaagaagatcgccgtggtcggctccggccccgcgggcatggcggcggcgcag
cagctcgcgcgtgccggtcatgccgtgacgctgttcgagaagaacgaccgcgtcggcggc
ctgctgcgttacggcatccccgacttcaagatggagaagacccacatcgaccgccgcgtc
aagcagatggaggccgagggtgtggtcttccgcaccggcgtgctggtgggcgagtggccg
aaagacggacccgccagcaaggtcaccaactgggccaaggaaagcatcagcgccgaccag
ctcaaggccgagttcgatgccgtgctgctgaccggtggctccgagcagagccgcgacctg
ccggtgccgggccgtgatctggacggcatccatttcgcgatggaattcctgccgcagcag
aacaagctcaacgcgggcgacaagctcaagggccagctgcgtgccgatggcaagaacgtg
atcgtgatcggtggcggcgacaccggcagcgattgcgtgggcaccagcaaccgccacggt
gcggtcagcgtgacgcagttcgaggtcatgccgcagccgccggtcgaagagaaccgcccg
ctgacctggccgtactggccgctcaagctgcgcacctcgtcgagccacgaagaaggctgc
agccgcgagttcgcgatctccaccaaggagttcatcggcgaaaagggccgcgtcaccggc
ctgaagaccgtgcatgtcgagttcaaggacggcaagctggtcgacatccccggcaccgag
aaggaatacaaggccgacctggtgctgctggcgatgggcttcgtcaatccggtggcgacc
gtgctcgatgccttcggcgtcgagaaggatggccgcggcaatgccaaggccggcgtcgac
gaggtcggcggctacaagaccaatgtcgccaaggtgttcgtcgccggtgacatgcgccgc
ggccagtcgctggtggtgtgggcgatccgcgaaggccgccaggccgcgcgcgcggtcgac
gagttcctgatgggggcgacgacgctgccgcgctga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (5)   
   KEGG ENZYME (2)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-LCH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (29)   
   Pfam (29)   
All databases (58)   

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