KEGG   Latimeria chalumnae (coelacanth): 102346718
Entry
102346718         CDS       T02913                                 
Symbol
SMAD1
Name
(RefSeq) SMAD family member 1
  KO
K04676  mothers against decapentaplegic homolog 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    102346718 (SMAD1)
SSDB
Motif
Pfam: MH2 MH1 IRF-3 DUF4223
Other DBs
NCBI-GeneID: 102346718
NCBI-ProteinID: XP_005995606
Ensembl: ENSLACG00000011249
Position
Un
AA seq 487 aa
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPGWTILENGNSRLSFEDQMRECIFLPPVLVPRHSEFNPQHSLLAQFRI
PAQNEPHMPHNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSTYPHSPASSDPGSPFQVP
ADTPPPAYMPPEDQMTQDGSQPMDTNLMAPPLPQEISNRADVQAVAYEEPKHWCSIVYYE
LNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYY
VGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNH
GFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPH
NPISSVS
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgaatgtgacgagcttgttctccttcactagtccagctgtgaagaggcttttgggttgg
aagcaaggggatgaagaggagaagtgggctgaaaaagcggtggacgccctggtgaagaag
ctgaagaagaagaagggcgccatggaagagctggaaaaggctctgagctgcccagggcag
cccagcaactgcgtcacaattccccgctccctggacggccggcttcaggtttcacacagg
aaggggctcccgcatgttatttactgccgtgtgtggcgctggccggacctccagagtcac
cacgaactaaagccgctggagtgctgtgaatttccctttggatcaaagcagaaggaggtc
tgcattaacccttaccactacaagcgggtggagagtcctggatggaccatcttagaaaat
ggaaatagtagactttcctttgaagatcaaatgcgagagtgtatttttcttcctccagtg
ttggttccgagacacagtgagtttaacccacagcacagcctcctggcacagtttcgcatc
ccggcacagaatgagccccacatgccacataatgccaccttcccagactcgttccagcag
ccgaatagtcacccgtttcctcattctcccaacagcagttaccccaactcgcctggaagt
agcagtacttaccctcattcccctgcaagctctgacccaggcagtccttttcaggtgcca
gcggatactcctcctcctgcatacatgcctccagaggaccagatgactcaggatggatct
cagccgatggatacaaacttgatggcccctcccttgccccaggaaattagtaaccgagca
gatgttcaggctgttgcttatgaggagccaaaacactggtgctctattgtctactatgaa
ctcaacaatcgtgtaggagaagcattccatgcctcctctacaagtgtgttggtggatggc
ttcactgatccctcaaataacaagaacagattttgccttgggcttctgtccaacgttaac
cgcaattccaccatcgaaaataccaggcggcatattggcaaaggagttcacctttactat
gtgggaggtgaggtttacgcagaatgcctaagcgacagtagcatttttgtgcagagccga
aactgcaactaccatcatggatttcaccccaccaccgtctgcaagattccaagtggctgc
agtctgaaaatcttcaacaaccaggagttcgcccagcttctggcccagtcagtaaaccat
ggttttgaaaccgtctatgagctgactaagatgtgcaccatccgtatgagttttgtaaag
ggctggggcgccgagtaccatcgtcaggacgtaaccagcaccccctgttggattgagata
cacctgcatggtccccttcagtggctggataaagttcttactcagatgggttctcctcat
aatcccatttcttctgtatcctaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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