KEGG   Latimeria chalumnae (coelacanth): 102347181
Entry
102347181         CDS       T02913                                 
Symbol
TRIM71
Name
(RefSeq) tripartite motif containing 71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102347181 (TRIM71)
   04121 Ubiquitin system [BR:lcm04121]
    102347181 (TRIM71)
Enzymes [BR:lcm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102347181 (TRIM71)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102347181 (TRIM71)
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102347181 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 SGL Invasin_D3 PspA_IM30 YlbD_coat DUF4094
Other DBs
NCBI-GeneID: 102347181
NCBI-ProteinID: XP_014346638
Position
Un
AA seq 566 aa
MGRHVGHSFIYLQDAIQDSRALTIQLLTDAQQGRQAIQLSIEQAQAVAEQVEMKAKVAQT
EVKAVTSRHKKALEERECELLWKVEKIRQVKTKSLFLQVEKLRQNLNKLDSTISAVQQVL
EEGRNMDILLARDRMLSQVQELKNMRGLLQPQEDDRIMFTPPDQALYLAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVATFSVVGYDHDGEPRLSGGDMLSVVAMGPDGNLFAAEVTD
QQNGTYVVSYRPQVEGEHLLSVTISNQHIEGSPFKILVKSGRSYVGIGLPILSFGGEGDA
DGKLCRPWGVCVDKEGYIIAADRSNNRIQVFKPCGTFHHKFGALGSRPGQFDRPAGVACD
SSRRIIVADKDNHRIQIFTFEGQFILKFGEKGTKTGQFNYPWDVAVNSEGKILVSDTRNH
RIQLFGPDGGFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTHNAQFLRPQGVAVDQEGRLIVADSRNHRVQIFEPNGNFLCKFGTQGNGFGQMD
RPSGIAVTPDGMIVIVDFGNNRILVF
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgggacggcacgtgggtcacagctttatctacctccaggatgccattcaggactccaga
gccctcaccatccaattactgactgacgctcagcaaggtcgccaggccattcagctgagt
attgaacaagcccaggctgtagcagagcaggtcgagatgaaggccaaggtcgcccaaacg
gaggtcaaagcggtcacatccaggcacaaaaaggccttagaagagcgtgaatgtgagctg
ctgtggaaggtggagaaaattcgccaggtcaagaccaaatccctctttctgcaagtggag
aagttgcgtcagaacttgaacaagctggatagcacaatcagcgcagttcagcaggtcctg
gaggagggaaggaacatggatattcttctagctcgcgaccgcatgctatctcaggtacaa
gagctgaagaacatgaggggcctccttcagccccaggaagatgaccgcatcatgttcaca
cctccagaccaggccttataccttgccatcaagtccatgggctttgtcagcagcggtgct
tttgcgccgttgacgaaggccactggcgaaggcctgaaacgtgcactgcagggtaaggtt
gccacgttctctgtagttggctacgaccatgacggcgagccccgcctttctggtggcgac
atgctttccgtggtagcgatggggccagatggaaacttgtttgctgcggaggtgactgac
caacagaacggcacctacgtcgtcagctaccggccccaagtggagggtgagcacctcctc
tctgttaccatttccaatcagcatatcgaaggcagcccatttaaaatcctggtcaaatca
gggcgcagttatgtgggcattgggctacccattctttcctttggaggggagggagatgcc
gatggtaagctgtgtcgcccttggggggtgtgtgtggataaagaaggctacatcattgct
gctgatcggagcaataaccgcattcaggtgttcaaaccctgcggcacctttcatcataag
tttggcgccttgggatcccggcctggccagttcgatcggcctgcaggggttgcatgcgat
agctcccgcagaattattgttgcagacaaggacaatcatcgcatccaaattttcactttt
gaagggcagtttatcttgaagtttggagaaaaaggaaccaaaactggacagttcaactac
ccgtgggatgtggcggtcaactccgagggcaaaatcttggtctccgacaccagaaaccat
cgaatccaattgtttgggccagacggggggtttcttaacaagtatggctttgaaggggca
ctctggaagcactttgattctccacggggggtgactttcaaccacgagggccatctggtg
gtgactgactttaacaaccataggcttctagtcatccacccagactgccagtctgcccgt
ttcctaggctcagaaggcacgcacaatgcgcagttcctccgcccgcagggtgtggctgtc
gaccaggagggccgcctcatagttgctgactccaggaaccaccgggtgcagatattcgag
ccgaatggcaactttttatgcaagtttgggactcagggtaacggctttgggcagatggac
cgcccatcaggtatagcagttacccctgacggaatgattgtcattgttgactttggaaac
aatcgtatccttgtgttctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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