KEGG   Latimeria chalumnae (coelacanth): 102347284
Entry
102347284         CDS       T02913                                 
Symbol
RNF139
Name
(RefSeq) ring finger protein 139
  KO
K15703  E3 ubiquitin-protein ligase RNF139 [EC:2.3.2.27]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcm04121]
    102347284 (RNF139)
Enzymes [BR:lcm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102347284 (RNF139)
Ubiquitin system [BR:lcm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    102347284 (RNF139)
SSDB
Motif
Pfam: TRC8_N zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_11 zf-RING_UBOX zf-ANAPC11 Mito_fiss_reg zf-RING_10
Other DBs
NCBI-GeneID: 102347284
NCBI-ProteinID: XP_006007365
Position
Un
AA seq 688 aa
MASPRARIAQHARAVLDVALRVPCIFLIDAIFNSSHDPSSGWLSTTSQIGLRLLGVLVST
VVLVLSQRALFKFYIFSFAFLIVASSTLVNYHATLHIDFHSVYYTAAFGTEFLPRNGPTL
WMALIILQLTFGIGYITLLGIQSTIAALIILDFLIPVVSLIIDLPVDARQIVAVTSGSIA
TVYTVVFLTLKLKWFYYSTRYVFLLVRHMYRIYGMQLLLEDTWKRIRFPDILRVFWLTRL
TAQAVILVYVVKMAANNTGSRSYLISWDDFCDVLCNLIISGCDSTLTVLGMSSVISSIAH
YLGLGILAFIGSTEDEDKRLGFVAPVLFFILALQTGLSGLAPEERLVRLSRNMCLLLTAI
LHFIHGMTDPVLMSLSASHVSSFRRHFPVLLVSFCLFFLPILLSYVLWHHYALNTWLFAV
TAFCVELCLKVVVSLTVYMLFMIDGYYSVLWEKLDDYVYYVRSTGSVIEFIFGVIMFGNG
AYTMMFESGSKIRACMMCLHAYFNIYLQAKNGWKTFMNRRTAVKKINSLPEVKGDRLSEI
DDVCAICYQEFTTSARITPCHHYFHALCLRKWLYIQDTCPMCHQKVYNDEHRENATFANN
NGYVAPNENQNRPVAQDQDGNGGEDIAAGAAAAAPPPPPPPPPVADLDNELHEDNDSIEY
DEEEWMTQNGGAALEEEYLNDDTDSSGD
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggcgtctcctcgagcccgaatcgctcagcatgctcgggctgtgttggatgtggccctg
agggttccctgcatcttcctcattgacgccatctttaactcgtcgcacgatcctagctca
ggttggctcagcactaccagccagattgggctccgcttactgggtgtacttgtatctact
gttgtcctggtcttgtcacagagagctctcttcaagttttatatatttagctttgcattt
ctaatagtagcatcatctacattggtgaactaccatgctactttgcacatagactttcat
agtgtctactatactgcagcttttggaacggagttccttcctcgcaatggacctacatta
tggatggcacttattatacttcaacttacttttggaattggatacattacattacttggc
attcagtccacaattgctgcactaatcatattggattttttaattcctgtagtgagcttg
atcattgacttacctgtagatgctcggcagattgtagctgttacttcgggctccattgca
acagtttacactgttgtatttttaactttgaaattaaaatggttttactattcaactcgg
tatgtatttctgctcgtacgacacatgtaccgcatttatgggatgcagctgttgctggaa
gatacatggaaaagaatccggtttccagatatattaagagtcttctggttaaccaggcta
acagctcaagctgttattttagtgtatgttgtaaagatggcagctaacaacacaggaagc
agaagctacttaatttcttgggatgacttctgtgatgtactttgcaatcttataattagt
ggatgtgattcaactttaacagtcttaggcatgagctctgtgatttcctcaatagcacat
tatttaggcctgggaatcttagcgttcataggatccacagaagatgaagataagcgcctt
gggtttgtagcacctgttctgttttttattttggctctacagactggcttgagtggatta
gcgccagaagaaagacttgttcgcctcagccgaaatatgtgccttctattaactgcaatc
ctgcattttatccatggcatgacagatcctgtgttgatgtcgcttagtgcctctcatgtt
tcttcttttcgtagacattttccagtcttgttggtgtcgttttgcctttttttccttcct
attctcctcagctatgttctttggcatcactacgcattaaacacgtggctgtttgcagta
actgccttttgtgtcgaactgtgcttaaaagtagttgtttctctcaccgtttatatgcta
ttcatgattgatggatattacagtgttttatgggaaaagcttgatgattatgtttattat
gtccgttcaactggcagtgttattgaatttatttttggagtaattatgtttggaaatgga
gcctatacaatgatgtttgaatcaggaagtaagatccgtgcatgtatgatgtgcttgcat
gcttatttcaacatctacttgcaagctaagaatggctggaagaccttcatgaatcgtagg
acagctgtaaagaaaataaactcccttcccgaagttaaaggtgaccgcttaagtgaaatt
gatgatgtttgtgcaatttgctatcaggagttcacaacttctgcacgcataaccccatgc
catcactacttccatgctctttgccttcggaagtggttatacattcaggacacatgccca
atgtgccatcagaaagtgtacaatgatgaacatagagaaaatgcaacatttgctaacaat
aatgggtatgttgcgcctaatgaaaaccagaatcgacctgtagctcaggaccaagatggc
aatggtggtgaagatattgctgcaggagcagcagcagcagcaccaccaccaccaccacca
ccaccacctgtggcagatctggataatgaacttcatgaagacaatgacagtattgagtat
gatgaggaggaatggatgacacagaatggtggcgcagcactggaagaggaataccttaat
gatgatacagattcaagcggagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (55)   

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