KEGG   Latimeria chalumnae (coelacanth): 102353640
Entry
102353640         CDS       T02913                                 
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor
  KO
K13295  aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102353640 (APLF)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102353640 (APLF)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102353640 (APLF)
SSDB
Motif
Pfam: zf-CCHH FHA_2 Yop-YscD_cpl CDC27
Other DBs
NCBI-GeneID: 102353640
NCBI-ProteinID: XP_005996939
Position
Un
AA seq 540 aa
MSDFKLQPLDGGISVIVPPGKTVIGRGPFLSVTDKRVSRNHGILEVVDTQLRIKSTHVNP
CFHRPFSKDKLEPLKKDEWCWLQPGDCFSLLPDSYVFRVLISNSDNEQTLGNSQMLDEKE
IEANQSDSPEVVQQLITGGVKKTLSVLPIHVDSEEPSFSTEDSVKRTISRKKSNEVQEDT
ACEHMFSNAGLGEPYKKPNPDQRKRVLPSWMLQGDLEVPTPLTSATKAGGKTGGGRGRGK
SATEAPKSSRKRLPSSESTEQSKATEQKTDKKKKTEEGQHTNPEPAFISTNNNKRKEVRD
RGAVSEDIGLCVKQSEWQLSDEEDRPASETKPPAVANNRQMSDNEEEKDQPASQQAQLDG
PAQSSTSHRETQEKVDKKQRLNTGASASDGSEDTSHSSKRTKQKRTPCIYGKGCYRKNPQ
HKEEYKHTSVSETERRRPKRKAAKKASGENLTNCLGLGSSWGLWRPTLAFIKGSNASRAE
AITSYVMSSATTLMEKLRSFFIQRFLCSKPGLLHQGKPSKIQALVVLKNTANEYLSRTFQ
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgtctgattttaaactacagcctttagatggaggaatctctgttatagtacctcctggt
aaaacagtaataggaagaggaccgtttttatcagtcacagataagagagtatctagaaac
catggtatactggaagtggtagatacacaacttcgtataaaatcgacacatgtaaatcct
tgcttccatcggccttttagtaaagacaagttggagcccctgaagaaagatgaatggtgc
tggttgcaaccaggcgattgcttctctttgctgccagatagttatgtgttcagagtcctc
atctctaactccgacaatgagcagactcttggaaacagccagatgctggatgaaaaagaa
attgaagctaatcagtcagactctccagaagttgttcagcagctaatcactggaggtgtc
aagaaaactttaagtgtgcttccgatacatgtagattcagaagaaccttctttttccacc
gaggattcagttaagagaactatctcaagaaagaaaagcaacgaagtacaagaggacaca
gcttgtgagcatatgttctccaatgcaggattaggtgagccatacaagaagccaaaccct
gaccagaggaagcgagtgcttccatcatggatgctgcagggagatttggaagtgccgact
ccattaacgtcagccactaaagcaggtggaaaaacaggagggggaagaggcagaggcaaa
agtgctacagaagcaccaaagtcaagtaggaaacgattgccctcctcagagtccactgag
caaagtaaagctacagagcaaaaaactgataagaaaaagaagactgaagaagggcaacat
acaaatccagagccagcctttatttcaactaacaacaataaaagaaaagaagtaagagac
aggggagccgtctcagaagatattggcctatgtgttaagcaaagtgagtggcagttgagt
gatgaggaagacagaccagccagcgaaaccaagccacctgctgtagcaaataacaggcaa
atgagtgataatgaagaagaaaaagaccagccagcaagtcaacaggctcagctggatggt
cctgcacaatcaagcacctcacacagggagactcaggagaaagtcgataaaaagcaaaga
ctaaacacaggggcctctgcgtcagacggatctgaggatacttcacacagttctaagaga
acaaagcagaaaaggaccccctgcatatatggaaaaggctgctacagaaaaaacccacaa
cacaaggaagaatataaacacactagtgtttcagaaactgaacgtagaagacctaagcga
aaggctgctaagaaagcctctggggagaacctcaccaactgcctgggccttggcagcagc
tggggtctgtggcgtcctacacttgcttttataaaggggagcaatgcatcaagggcagag
gccattacttcttatgtcatgtcatcagctactactttgatggaaaagctgaggtctttt
ttcatccagcgtttcctatgttccaaaccaggtcttttacaccaagggaaaccttcaaag
atacaagcattagtagttttgaagaatactgcaaatgaatacctttcaagaacatttcag
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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