KEGG   Latimeria chalumnae (coelacanth): 102354672
Entry
102354672         CDS       T02913                                 
Symbol
CNOT9, RQCD1
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102354672 (CNOT9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102354672 (CNOT9)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     102354672 (CNOT9)
SSDB
Motif
Pfam: Rcd1 ADSL_C
Other DBs
NCBI-GeneID: 102354672
NCBI-ProteinID: XP_005991825
Ensembl: ENSLACG00000017626
UniProt: H3BDT3
Position
Un
AA seq 299 aa
MHSLATAAPVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLSAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNPRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq 900 nt   +upstreamnt  +downstreamnt
atgcacagcttggctacagcagcacctgtgacaactgcactggctcaggtggacagagag
aagatctatcagtggattaatgagctgtccagccctgagacccgggagaatgcgctgctg
gagttgagtaagaagcgggagtctgttccagacctggcacccatgctatggcactccttt
gggaccattgctgctcttctacaggagattgtaaatatttacccttccataaatcctcca
accctgactgcccatcagtcgaacagagtctgtaatgccctggcactgctgcaatgtgtg
gcctcgcatccagagaccaggtcggctttcctttcagcccacatccccctttttctgtat
cctttcttgcacacagtcagtaaaacacgaccctttgagtatctacggctcaccagcctt
ggagtgataggagcgttagtgaagactgacgaacaggaagtgatcaactttctgctgaca
actgaaatcatccctctttgtctgcgtatcatggagtctggtagtgagctctccaaaacg
gttgctacatttattttgcaaaagatcctgctggatgacacgggtctggcctacatctgt
cagacgtatgagcgcttttcacatgttgctatgatactggggaagatggtcctacagctt
tccaaggagccatcagctcgcctgttgaaacatgtcgtacgctgctacctccggctctca
gacaaccccagggcccgtgaagcactgaggcagtgcttacctgatcagctgaaggactcg
accttcgcacaggtcctgaaagatgacacaaccaccaagcgctggctggcacagctggtg
aagaatctacaggagggacaggtcaccgacccacggggcatcccactccctccccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

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