KEGG   Latimeria chalumnae (coelacanth): 102355403
Entry
102355403         CDS       T02913                                 
Name
(RefSeq) uncharacterized LOC102355403
  KO
K08131  collagen type IX alpha
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102355403
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102355403
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lcm00535]
    102355403
Proteoglycans [BR:lcm00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   102355403
SSDB
Motif
Pfam: Laminin_G_3 Laminin_G_2 FlxA Laminin_G_1
Other DBs
NCBI-GeneID: 102355403
NCBI-ProteinID: XP_014349373
Position
Un
AA seq 610 aa
MHRGRGSGDNAGESRREADENSIRLSRFCFLKRWEPSSSSSFANRKIGFMNFFHFSKRVC
QHERSKEHVEAITRWIELAEGLEKGRTIDKDMQTCYQMQKDTWRNILSSLGYFAVLSHWD
VLKKHIRIILKCQSMTRWSTRVEAIRPLRNQVEGVLDALDEIKASHNLTPELKSEADSLQ
TNISEFSFIILAEVWCTILSKINIVSKKLQSPDLDIPTARGVLGGLRDALSELRSSGFVA
CKEAAASQAETLGISMQFTEKPSRRRKVMPGILAKDERSSDPEKVFECEVFNPVLDTVLT
QLDNRMPSSYPEESNSESFENEIELFANFCKRIFEDDLETKAPIDLLNYMYIHKRKRPSK
GFLTHLHLSTCLALQTLLWIPAFSQPSPQDSGNALDVNTVCPQIRIGQDDLPGFDLITQF
QLDVAHLRGVRRVEGSTLLQIAYRLEKEANFQIPTRILYPKGLPEEYSFVTTFRMMRETI
DTVWNLFQIVDEDGYKQIGLRLDGEQQAVEFFLVGQDGNLEVATFPGVSQLFNTEWHKIL
VGVEMNKITLFVDCQLVGSKPIKTKGTVNVDGETLIGRLDDDPSSSVVLPTSQFGGAGRA
VEGAIVQRRH
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgcaccgtggccgcggcagcggcgacaatgcgggagagtcaagacgcgaggcagacgag
aacagcatcagactgtcccgcttttgcttcttgaaacgttgggagccaagttcctcatct
tcctttgcgaaccgtaaaattgggttcatgaactttttccactttagcaagcgagtatgc
caacacgaacgttcgaaggaacacgtggaggcaatcactcgctggatagaacttgcagaa
gggttggaaaagggtcgcacaattgacaaagatatgcaaacctgctatcagatgcagaag
gacacgtggcgcaatattttgtcatctcttggatattttgctgtacttagtcattgggat
gtgttgaaaaagcatattcgcattatattaaaatgccaaagcatgacaagatggtcaaca
agggtagaggcaatccgtccactacgaaatcaggttgagggtgttcttgacgctttagac
gagatcaaggcttcacacaatcttacgccagaacttaagtcagaagctgatagcttgcaa
acgaacatttcagagttttcgtttattattttggccgaggtgtggtgtactatcttatca
aaaattaacattgtgagcaaaaaattgcagagtcctgatcttgacattccaacggctcgt
ggtgtacttggtggccttcgagacgcattatcagaattacggtcttctgggttcgttgca
tgtaaggaagctgctgcttcacaggctgaaacgttaggaatatccatgcagttcacagag
aaaccgtctcgaagaaggaaagtaatgccaggcatacttgcaaaggacgaaaggtcatca
gatcccgaaaaagtatttgaatgcgaggttttcaatcctgtcttagacacagtattaaca
caattggacaataggatgccaagcagctaccctgaggagtcaaactctgagagttttgag
aacgagattgagctcttcgccaatttttgcaagcgaatctttgaggatgacttggaaaca
aaggcgcccattgatctccttaactacatgtacattcacaaaaggaaaaggccgtcaaaa
ggatttttgacccatctacacctctctacctgtctagccttacagactctgttatggatt
ccagctttttctcagcccagccctcaggacagtggcaacgccttagatgtcaacactgtg
tgcccacaaataaggattggacaagatgatttacctggctttgacctgattacgcagttc
cagctagatgtcgcccatctccgaggggtgagaagggtggaaggttcaacactgctgcag
attgcttacagactggagaaagaagccaacttccaaattccaaccagaatattatatccc
aaggggctgcctgaggagtactcctttgttacgaccttccgcatgatgagggaaaccatc
gacaccgtttggaacctgtttcagatagtggatgaggatggctacaagcagattgggctg
cggctggacggagaacagcaggccgttgagttcttcctggttggccaagacggcaaccta
gaggtggccacatttccgggggtctcccagctgttcaacactgaatggcacaagatcctg
gtgggcgtggagatgaacaagatcaccctctttgtggactgccagctggtggggtccaaa
cctatcaaaaccaaggggaccgttaatgtggacggggagactctcattggaagactggat
gacgatcccagttcatcagttgtgttgccaacatcccagtttggtggagcgggccgtgct
gtcgaaggtgccatcgttcagaggagacattaa

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