KEGG   Latimeria chalumnae (coelacanth): 102356945
Entry
102356945         CDS       T02913                                 
Symbol
MSH4
Name
(RefSeq) mutS homolog 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcm03036]
    102356945 (MSH4)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    102356945 (MSH4)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV AAA_14 AAA_21 AAA_23 AAA_18 AAA_22 nSTAND3 ATPase_2 AAA_24 AAA_29
Other DBs
NCBI-GeneID: 102356945
NCBI-ProteinID: XP_014349280
Ensembl: ENSLACG00000007186
UniProt: M3XLC8
Position
Un
AA seq 955 aa
MFTKPGVCGGSTAAGETSFSGRCSSSSSEPEPGRRPRYNFGLMETPRSGEGKGDGYSASE
SGGTSSTERLVQNNKLPSGSHTSGFTPGAANANNTSRDSCFADKSSFAGNNSVLSVLSAP
SSSLCRDRDGARVGKTPLSAISHNTRSSCRMRTPQTGHSVTSSSAISAHCVASVIVAVVE
GRGLARGEIGMASINLRSPELILSQFADNTTYSKVITKLQILTPLEIIMPNTACDKGTAT
KLFSLITENFKTVAFTTVQRKYFNETKGLEYTEQLCIPEFNTVLMEVQSKYYCLAAAAAL
LKYVEFIQNSVYAPKSLKVTFQGSEQTAMIDSTSAQNLELVINNRDPRNSHTLFGVLNYT
KTPGGNRRLRSNILEPLVDAETINMRLDCVQELLQDEELFFSLQSVISRFLDTDQLLSVL
VQIPKQDTVTAAESKITNLIYLKHTLELVDPLKAALKNCKTSLLKAYCSSLDDNRFNIIL
DKIKTVINDDTRYTKGCLNMRTQKCYAVRPNINEFLDIARRTYAEIVDDIAGMITQLGEK
YNLPLKTSFSTARGFFIQMNTDGVILPSGQLPSEFMKVTKMKNAYSFTSVDLIKMNERCQ
ESLREIYHMTYLIVCRLLSEIYEHIHCLYKLSDAVSMLDMLLSFAHACTLSDYVRPEFTD
TLAIKQGRHPILEKISVEKPVPNNIYISEGSNFVIITGPNMSGKSTFLKQIALCQIMAQI
GSFIPAEYASFRIAEQIFTRIGVDDDIETNSSTFMKEMKEITFIIQNANDRSLIIIDELG
RGTSTEEGVGICHAICEYLLNLKAFTLFATHFLELCHLDALYPNVENNHFEVQHTRKSPQ
TTEKITYTYVLSKGHTEEKNYGLKAAEVSSLLPSIIHDAKEITSQISKQLWQKQMSTPES
LRQRAVYRLATRLVQTARNSCLDANSLRVYFRGLKKRYESDCLATEEATEMEVEE
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgtttacgaagccgggagtctgtggcggcagcacggcggcaggtgagacctcattctcc
ggccgctgctcctcctcgtcctcagagcccgagcctggacgccgaccgcgttacaacttc
ggcctgatggaaacgcccaggagcggcgaggggaaaggcgacggctactccgcttcggaa
tctggcggtacctcttctacggaaagattggttcaaaataataaactgcccagcggttcg
cacaccagcggattcacccctggtgctgccaatgcaaataatacatcaagagactcgtgt
tttgcagacaaaagttcatttgcaggaaataatagcgtgctcagtgtgctgtctgctcca
agttcctctttgtgtagggaccgtgatggtgccagagtaggtaaaacacctttgtctgcc
atcagccacaatacaagatcaagctgcagaatgcgaactccccagactggtcattcagtg
acttcctcatctgcaatctcagctcattgtgttgcgtcagtaattgtggctgtggtggaa
ggaaggggtctggcccgaggtgaaattgggatggctagtattaatctaagaagcccagaa
ttgatattgtcccagtttgcagacaataccacatattccaaggtgattactaaactgcag
attttaacaccattggaaataataatgccaaacactgcctgtgataaaggaactgcaacc
aaattattcagcctcattacagaaaactttaagactgtagcttttacaactgttcagcga
aaatattttaatgaaacaaaaggtttggagtatacagagcaactgtgtatccctgaattc
aacacagtactaatggaggtccaatctaagtactactgtttagcagctgctgcagcattg
ctaaagtatgttgaatttattcagaattctgtctatgctccaaagtctctcaaagtaact
ttccaagggagtgaacaaacagccatgatagattctacatcagcccagaatcttgaacta
gtgatcaacaaccgggatcctaggaatagccatacactcttcggagttttgaattacaca
aaaactccagggggaaatcgaagacttcgttccaatatcttggagcccctggtggatgca
gagacaattaacatgaggttggattgtgtccaggagctacttcaggatgaggaattattt
ttcagtcttcagtcagtgatatcgaggtttttggatactgaccagcttctttctgttcta
gtacagattcccaaacaagacacagttacagcagctgaatcaaaaataacaaatttaatt
tacctgaaacatacattagagcttgtggatcccctcaaggctgctttgaaaaactgtaag
acatctctgctgaaggcttactgcagttctctggatgataacaggttcaatatcatactt
gataaaattaaaactgtcattaatgatgataccagatacacaaagggatgtctaaacatg
aggacacaaaaatgttacgcagtcagacctaacatcaatgaatttcttgatattgcccga
agaacttatgcagaaattgtagatgacatagcaggaatgataacacaactgggtgagaaa
tacaatttgcctttgaagaccagcttcagcacagctcgtggattctttatccagatgaat
actgatggggttatattacccagtggtcagcttccttcagagtttatgaaagttacaaaa
atgaagaatgcatacagcttcacttctgttgatttaattaaaatgaatgaaaggtgccag
gagtctttaagggaaatttatcacatgacatacctgatagtgtgtagactactgagtgag
atatatgagcacatacattgtttgtacaagctatcagatgctgtttccatgttggatatg
ttgctttcatttgcacatgcctgtaccctttctgattatgttcgcccagaatttactgat
actttagcaatcaagcaaggaaggcaccctattctagaaaagatatcagtagaaaaacct
gttcctaacaatatatacatttcagaaggcagcaactttgtaatcatcactggacctaat
atgagtgggaaatcaacctttttaaaacaaattgctctctgtcaaatcatggcacagatc
ggatcttttattccagctgaatatgcttcctttaggatagccgaacaaattttcacgagg
ataggtgtagatgatgacatagaaactaattcatcaacatttatgaaagagatgaaagag
ataactttcataatccagaatgcaaatgataggtcattaataataattgatgaacttggt
agaggaactagtacagaggaaggtgtaggaatttgtcatgcaatctgtgaatatctactt
aatttgaaggctttcacattgtttgctactcatttcttggaattgtgtcatctggatgct
ttgtacccaaacgtagaaaacaaccactttgaagtgcagcatactagaaaaagtccccaa
acaactgaaaagatcacctacacttatgtgctttccaaaggacacacagaggaaaaaaac
tatggactaaaagcagcagaagtttcctctcttctaccatcaataatacatgacgcaaag
gagattacttctcagatcagtaaacaactatggcaaaagcaaatgagtactccagagtct
ttaagacaaagggctgtgtatcgtctagccacacggttagttcagactgcaagaaactcc
tgcttagatgcaaatagtttacgagtgtatttcagaggactcaagaaacgttatgaatct
gattgtctggccactgaagaagcaacagaaatggaggttgaagaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (37)   

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