KEGG   Latimeria chalumnae (coelacanth): 102357300
Entry
102357300         CDS       T02913                                 
Symbol
NVL
Name
(RefSeq) nuclear VCP-like
  KO
K14571  ribosome biogenesis ATPase
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102357300 (NVL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    102357300 (NVL)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    102357300 (NVL)
SSDB
Motif
Pfam: AAA Nucleolin_bd AAA_lid_3 RuvB_N AAA_16 AAA_5 TIP49 AAA_2 AAA_22 AAA_14 AAA_28 Mg_chelatase AAA_33 RNA_helicase Zeta_toxin nSTAND3 AAA_17 AAA_18 ABC_tran NACHT Vps4_C AAA_25 AAA_3 Rad17 ATPase Viral_helicase1 TsaE IstB_IS21 NB-ARC Sigma54_activ_2 AAA_19 Parvo_NS1 Cytidylate_kin2 DUF815
Other DBs
NCBI-GeneID: 102357300
NCBI-ProteinID: XP_014351867
Ensembl: ENSLACG00000004446
Position
Un
AA seq 858 aa
MKNRGGPFVDNRLKERIRQYLTNSSSRYVDIGVLTADLQRIYSVDYGRRKRNAFRIQVEK
VYRLICGEKEDKDLEGLEDEHLLKRARFGQGNDGEGETYAEDSSDSEDFPEYPQTNHMNN
SLLSLYRKGNADSVSSTPAKKETVSTSTPVPVTSTAAKVPSRTAEASEGGWFVDRNPSGT
REGSLLIDLCGEEDELRSGRQRLEKPVDYSLLEQSETKKKKKPRKEKRKSELSQDVDGEI
ESALLGKKAKGKAPELTHSTVKFEDVGGNEETLKEVCKMLIHMRHPEIYQQLGVVPPRGF
LLHGPPGCGKTLLAQAIAGELELPMLKVAATEIVSGVSGESEQKLRELFEQAVTYAPCIL
FIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLTAAAQVLVIGATNRPDSLDPALR
RAGRFDREICLGIPDEAARERILRTLCRKLKLLEPFDFQQLAHLTPGYVGADLMALCREA
AMCAVNRVLMEFQSKRPKEVTVGESAHSLEEGMEVEENMQKQQPAQDDLERLLVLLKELT
PLPEEQLQKLCIHMEDFTVSISSVQPSAKREGFATVPDVTWADIGALEEIREELTMAILA
PVQNPDQFKALGLIAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGES
ERAVRQVFQRARNSAPCVIFFDELDALCPRRSDHESGASVRVVNQLLTEMDGLETRKQVF
IMAATNRPDIIDPAILRPGRLDKTLYVGLPPPSDRVAILKTITKCGTRPPLEADVNLECI
GNDERCDCFTGADLSALVREASISALRFSFQSSGNSKAPSGEIKVSQQHFEEAFKKVKSS
VSKKDQMMYEQLRQSLCR
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgaagaatcggggtggaccttttgttgataacagactcaaagaaaggatcagacagtac
ctgaccaacagcagcagtcgttatgtggacattggtgtcttaacagctgacttacagaga
atctacagcgtagactatgggcgaagaaaaagaaatgcctttaggattcaggttgaaaaa
gtatacagattaatctgcggtgaaaaggaagacaaggatttagaaggcttagaggatgaa
catttgttaaaaagagcaagatttggccaagggaatgatggggaaggggagacctatgct
gaagactcttcagacagtgaggatttcccagaatacccacaaaccaatcatatgaacaac
tccttgttgtcgctttaccgaaagggaaatgctgattctgtttcatcaactcctgcgaag
aaagagacagtgagtaccagcactccggttcctgtcacttccacagcagctaaagttcct
tccaggacagctgaggcctccgagggtggctggtttgttgatagaaacccaagcggaacg
agagaaggaagcttgcttattgatctttgtggggaagaggatgaactaaggtcagggagg
cagaggcttgagaaaccagtagattattctctcctggagcaaagcgaaactaagaaaaag
aagaaaccaaggaaagaaaaacgaaagagtgagctgtctcaggatgtagatggagaaata
gaatctgctctactcggcaagaaagcaaaggggaaggcaccggagttgacacactccact
gtgaagtttgaggatgtgggaggtaatgaagaaactctcaaagaagtgtgtaaaatgcta
attcacatgcgtcatccagagatataccagcagctgggggtggttcctcctcgcggattt
ctcctacatggaccgcctggctgtgggaaaactttactggcacaagccattgctggtgaa
ttggagcttccgatgttgaaagttgctgctacagagatagtgtctggggtatctggagag
tctgaacagaaactgcgagagctttttgaacaagcggtgacatacgccccttgtatcctc
tttatcgatgagattgatgccatcaccccaaaacgagaagttgcctccaaggacatggag
cggaggattgtggcacagctgctaacctgcatggatgatcttaacagcttgacagctgca
gctcaagttctagttattggcgctactaacaggccggactcattggacccagccctgagg
cgggctgggcgctttgatcgagaaatctgtctaggaattccagatgaggcagcaagagaa
agaatcctgcggacgctgtgccggaagctgaagcttctggagccctttgatttccagcag
cttgctcatctcactcctggttacgtaggcgctgacctgatggcactttgccgggaggca
gccatgtgtgcggtgaaccgggtgctgatggaattccagagcaagaggcctaaagaagtc
acagtgggagagtcggcacacagtctggaggaagggatggaggtggaggagaatatgcag
aagcagcagcctgcacaggatgatcttgaaagactcttggtattattaaaagaactaacc
ccactgccggaagaacagcttcagaaactctgcatccatatggaagattttacagtgtcc
atctcctctgtgcagccttctgccaagagagaggggtttgccacagttccagatgtgacg
tgggccgatattggagccctggaagagatcagagaagagctcaccatggcgatattggct
cctgtgcagaatcctgaccagtttaaagctcttggtctcatagctccggctggcgtgttg
ctcgcaggccctcctggttgtggaaaaacgttactggctaaggctgttgcaaatgaatct
ggcctcaatttcatttcagtgaaaggccctgagctgttaaacatgtatgtaggcgaaagc
gaacgagcagtccgtcaggtgttccagagagctaggaactctgccccttgtgtgattttc
tttgatgaactagatgcactgtgcccgcgaagatcagaccatgagtctggtgccagtgtc
cgtgttgtaaaccaactgctgacagagatggatggacttgagacacgcaagcaggttttt
atcatggcagccacgaataggccagacataattgacccagcaatactgcgcccaggccga
ctagacaagacactttatgttggcttgcctccaccttcagaccgtgttgctatcctcaaa
accatcactaagtgtggtactcgaccaccactggaagctgatgttaacctggagtgtatt
ggcaatgatgagcgttgtgactgcttcacgggtgcagatctgtctgctttagtacgtgaa
gcttcaattagtgccctgcgattttcctttcagtcctctggcaacagtaaagctccttca
ggagaaatcaaggtcagtcagcaacactttgaagaagctttcaagaaagtgaaatcatct
gtatcaaaaaaggaccaaatgatgtatgaacaactgagacagtcactttgccgatga

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