KEGG   Latimeria chalumnae (coelacanth): 102358688
Entry
102358688         CDS       T02913                                 
Symbol
IFT57
Name
(RefSeq) intraflagellar transport 57
  KO
K04638  intraflagellar transport protein 57
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lcm03037]
    102358688 (IFT57)
Cilium and associated proteins [BR:lcm03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   102358688 (IFT57)
SSDB
Motif
Pfam: IFT57 MCPsignal Glyco_transf_25 DUF1664 ISG65-75 KxDL DUF4460 Syntaxin_2 DUF745 VASP_tetra MscS_porin DUF4407 COG3_N Exonuc_VII_L
Other DBs
NCBI-GeneID: 102358688
NCBI-ProteinID: XP_005998731
Ensembl: ENSLACG00000011996
UniProt: M3XJ29
Position
Un
AA seq 412 aa
MSEEPRRGQEEDDKGPGAAFQMFVLMEDLLDKLKLLNYEEEVLRKNNMKALSRHYFAIPT
NPGEQFYMFSTLAAWMINKAGHDFEQPQEYDDPNATLSSILSKLRAFGGLVDFPPSKLKA
GHGEHVCYVLDSLAEEALKHTGFSWKRPIYPTEELEEESVMEDDAELTLNKLEEEVVEDA
EDYEEENYIDLEALKAQTHKMEVGDSAKPEEILESTTDAAEWNLEVERVLPHLKVTIRTD
NKDWRIHVDQMHQHKEGIETSLKETKGYLDKLQDEITRNLEKVNSREKYINNQLEHLVQE
YRTVQAQLSEAKERYQQGSGGVTERTRILSEITEELEKVKQEMEEKGSSMTDGAPVVKIK
QALTKLKQEIIQMDIRIGVVEHTLLQANLKEKSNMTRDMHATMIPESAIGGY
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtcggaagagccgaggcgcgggcaggaggaggacgacaagggccccggagccgccttc
cagatgttcgtgttgatggaggatctgctggacaaactcaaactgctcaactacgaagag
gaggtgctgcggaagaacaacatgaaagctttatccaggcactactttgcaattcccaca
aaccctggagaacagttctatatgttcagcactcttgcagcttggatgatcaacaaagca
gggcatgattttgaacagccacaagagtatgatgaccccaacgccacactatcgagcata
ttatcaaagctgagagcgtttggtggtttagttgacttccctccatcaaaactgaaagcg
ggccatggagagcatgtatgctatgttctggattccttggctgaggaagccctaaaacat
actggatttagctggaagaggcccatataccctacagaagaacttgaagaggagtctgtg
atggaagacgatgcagaattaacactaaacaaactagaggaagaagtggttgaggatgct
gaagattatgaagaggaaaattatattgatctagaagcgttaaaggcacaaacgcacaaa
atggaagtgggcgactccgccaagcctgaagagatattagagtccactacagatgcagca
gagtggaacctggaagtagagcgtgttctcccgcacctcaaagttaccattaggactgat
aataaggactggcgaatccatgtagatcaaatgcaccaacacaaagaaggaattgaaaca
tctttaaaagagaccaagggctaccttgacaaacttcaggatgagatcacaagaaacctg
gaaaaggtcaatagtcgagagaaatacatcaacaaccaattggaacatttagttcaggaa
tatcgtactgttcaagcccagctaagtgaggcaaaggagcgctatcagcaaggaagtgga
ggagtaactgaaaggactagaatcctttctgagattacagaagagttggagaaagtgaag
caggagatggaagaaaagggaagcagtatgactgatggagcacctgtggtgaagattaaa
caagcattgacaaagctaaagcaagaaattattcaaatggacatccggattggtgtagtg
gaacacactctgctgcaggctaatctgaaggaaaaatctaacatgactagggatatgcat
gcaaccatgattccagagtcagcaataggaggctattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (44)   

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