KEGG   Latimeria chalumnae (coelacanth): 102359809
Entry
102359809         CDS       T02913                                 
Symbol
MYO5C
Name
(RefSeq) myosin VC
  KO
K10357  myosin V
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    102359809 (MYO5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102359809 (MYO5C)
   04131 Membrane trafficking [BR:lcm04131]
    102359809 (MYO5C)
   03029 Mitochondrial biogenesis [BR:lcm03029]
    102359809 (MYO5C)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcm04812]
    102359809 (MYO5C)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     102359809 (MYO5C)
   mRNA cycle factors
    P-body specific factors
     102359809 (MYO5C)
Membrane trafficking [BR:lcm04131]
 Others
  Actin-binding proteins
   Myosins
    102359809 (MYO5C)
Mitochondrial biogenesis [BR:lcm03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    102359809 (MYO5C)
Cytoskeleton proteins [BR:lcm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     102359809 (MYO5C)
SSDB
Motif
Pfam: Myosin_head DIL IQ Myosin_N Csm1_N AAA_16 AAA_22
Other DBs
NCBI-GeneID: 102359809
NCBI-ProteinID: XP_014351997
Ensembl: ENSLACG00000007284
UniProt: H3AF09
Position
Un
AA seq 1752 aa
MIPGSCDNSWVCQSVEYNRVWIPDEEEVWKSAEITKDFKSGENVLHLQLEDGTEISYTVD
PIKQTLPHLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYCGIILVAINPY
KQLPIYGDAIIYAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSA
RYAMRYFATVSKSSSKAHVEDKVLASNPLTEAIGNAKTTRNDNSSRFGKYTGIGFDKRYQ
IIGANLRTYLLEKSRVVFQSENERNYHIFYQLCALAKESEYQHLKLVSADEFNYTSMGGT
TVIEGVSDKADMVETQKTFTLLGLKEDFQMDVFKVLAAILHLGNVQVKAASEDKSYVSLD
DHHLNIFCELLDIDNSKVAHWLCNRKLMTSSETVIKPMMKNQAVNARDALAKQIYAYLFD
CIVGKINNALLFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLE
QEEYMKEDIPWTLIDFYDNQPVINLIEAKMGILDLLDEECLFPQGTDENWLQKLYNNYLD
KNPLFEKPRMSSKAFMIQHFADKVQYKCEGFLEKNRDTIYEELIEILKTSKFQLLVKFFQ
EDEVPSSPFNSSIKIKPAWPVVKPTNKQLRKTVGNKFRSSLYLLMETLNATTPHYVRCIK
PNDDKLPFEYDSKRVVQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQEISQN
DKKQICKISLQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRSDKLRGACITIQKNVRSWI
QRKKFLRLKYAVITIQQYFRGQRTVRQAVSATALKQAWAAIIIQKYCRRFLVRRIYQLIY
VATVTIQAYTRGYLARKKYQKILQEHKAIVLQKYARAWLARRRFQSIRRFVLNIQLSYRV
QRLQKKLEDQNKENHGLLERLTGLAAVHSSNVSKLQKLETEFEKSVAQKKILEEQIKKSK
EETEQKVTKLEQQYTSLEGQKQELEKKLQDKSREMEEKMDDLTKQLFADLEKEERQRKIL
ETNFQNQKKDYEKQIEALHEEIRCLREENIRLQQQSQDDFQMNENLKQEIEQLKKQAKEI
PGLKKEILLLEAQKIDTEKQIQTQVKDMREKMSEVTKQLLGSLEIEGLQNRLSQEDLEQM
NEDGELWFAYDGLKKATRVLECHFQAQKESYEKEIETLNFKIEHLNQETNHLQKLFREEN
SVNDNIRQEVTRLSAENMIIPELKQQVSELKRQKLDLENSLKEQASEMKEKMEKVSIQLH
HDLEEEGSQRRSLELQRQNYEKEKEELVAKLEEIQEKNNQLKKEFKSESEAKGKIRQEIS
RLTAENMDLEEQIDMKNKSIRKLQDQIQALTKTIEKESKAGAPPPPKEYIGMLEYKSEDE
AKLIKHLVLDLKPRGVVVNMFPGLPAHIMFMCVRYADHLNDADRLKSLMNSIINGIKEAS
QNHAGDFEMLSFWLSNIYHFLNCLRQYSGEEEFMKHNTSRQNNNCLKNFDLSEHRQILSD
LAIRIYQQFITVMENNIQSMIVPGMLEHESLQGISSMKPTGLRKRSSSIKEDPDSYTITT
LLQQLSYYYNTMCQHGMDPELIKQAVRQLFFLIGAVTLNNLFLRKDMCSCRKGMQIRCNI
SYLEEWLKEKNLQNSSAKETMEPLSQVAWLLQVNKTTDDDAKEICDRCSSLSAVQIVKIL
NSYTPIDDFEKRVAPSFVRKVQSMLHNREDMPQLVLDTKYQFQVTFPFTPSSQALETIQV
PSSLKLGFLIRV
NT seq 5259 nt   +upstreamnt  +downstreamnt
atgattcctggttcatgtgacaacagttgggtttgtcagagtgtggaatataacagggtt
tggatccctgatgaagaggaggtttggaagtcagcagagattacaaaggactttaaatct
ggggagaatgtgcttcatctacagttggaagatggaactgaaataagctacacagttgat
cctataaagcaaactctaccacatcttcgtaatcctgacatactggttggggaaaatgac
cttacagccctcagttatctccatgagcctgctgttctccataacctcaaagttcgcttc
gtggaatccaaacttatttacacatattgtggaattattcttgtggcaatcaatccctac
aagcagcttccaatctatggagatgccatcatttatgcatacagtgggcaaaatatgggc
gatatggatccacatatatttgctgtggcagaggaggcttataagcagatggccaggaac
aataaaaaccaatctatcatagtgagtggagagtcgggagctggaaaaacagtatctgcc
aggtatgctatgaggtactttgccacagtaagtaaatcaagcagtaaggctcatgtggag
gataaagtgctggcatcaaatccattaacagaggctattggaaatgctaagaccacacga
aatgataatagtagtcgctttggtaaatatacaggaattggtttcgataaaaggtaccaa
attattggagcaaacttacggacatacttgcttgagaagtccagagtagtgtttcagtca
gaaaatgagagaaattaccatatattctaccagctttgtgccttagctaaagaatcagaa
taccagcatctgaagttagtaagtgcagatgagtttaattatacaagcatgggtggcact
actgtaattgaaggtgtcagtgacaaagctgatatggtggagactcaaaagacattcact
ctgcttggtctgaaggaggactttcagatggacgtatttaaagtgctggcagcaattctg
catttgggcaatgtgcaagtaaaagcagctagtgaagataaatcctatgtcagtcttgat
gaccatcacctgaatatcttttgtgagctgctggacatagataacagtaaagtggcacat
tggctttgcaatagaaaacttatgacaagctccgagactgtaataaaaccgatgatgaaa
aatcaagcagtcaatgccagggatgcattggctaaacagatatatgcttacctgtttgac
tgcattgtgggaaagatcaataatgcattactgttttctggaaagcagcatacatttatt
ggagtgttagatatttatggttttgaaacatttgatgtaaatagttttgaacaattttgt
atcaactacgccaatgaaaaactgcaacagcagtttaacttacacgtgtttaaacttgaa
caggaagaatacatgaaggaggatatcccttggactctgattgatttttatgacaatcag
ccagttatcaatctcattgaagctaaaatgggaattttagatctactggatgaagagtgc
ttgtttccacaaggtacagatgaaaactggcttcagaagctgtataataattaccttgat
aaaaaccctctgtttgaaaagccaagaatgtcaagtaaggcttttatgatccagcacttt
gctgacaaggtacagtacaaatgtgaggggtttctggagaagaacagagacacaatctat
gaagagctgattgaaatcctgaagactagcaagtttcagcttctggtaaagttttttcaa
gaagatgaggtaccttcatcaccttttaattcaagtataaaaataaagcctgcctggcct
gtagtaaaaccaacaaacaagcaactacgaaaaacggttggcaacaagtttcgcagttct
ctgtacttgttgatggagaccctcaatgctactacaccccactatgtacgatgtataaag
cccaatgatgacaaactaccctttgaatatgattcaaagagagttgtacaacagctgcga
gcctgtggtgttttggaaaccattcgaatcagtgcgcaaagctatccatccaggtggaca
tatattgagttttttagccgctatagtattttgatgacccaacaagagatctcccagaat
gacaaaaaacagatttgtaagatttccctgcaaaggctaatacaggaccctaaccagtat
aagtttgggagaacaaagattttctttagagctggacaagtggcctatttggagaaacta
cgttcagataagttaagaggagcttgcatcactattcagaaaaatgtccgtagttggatc
cagcgaaagaaattcctccgcttgaaatatgctgttattacaatacagcaatatttccgt
ggtcagcgaacagtacggcaagcagtgagtgctacagccctgaagcaggcatgggcagcc
attatcattcagaaatactgtcgtagattcctggtacgccgtatttaccagctaatttat
gtagccactgtgacaatacaagcatacaccaggggataccttgcaagaaagaaatatcaa
aagatactgcaggaacataaggctattgtacttcagaagtatgcccgtgcttggctggcg
agacgtaggtttcagagcattcgaagatttgtgttgaacattcaactctcgtatagggta
cagagactgcagaagaaactagaggatcagaacaaagagaatcatggattgcttgagaga
ttgacgggtctagcagcagttcactccagtaatgtcagcaaactccaaaaacttgaaaca
gaatttgaaaagtcagtagcgcaaaagaaaatacttgaggaacaaattaagaaatctaaa
gaagaaactgagcagaaagtaacaaaacttgaacaacagtatacaagtcttgaaggacaa
aaacaggagctagaaaaaaaacttcaggataagtcacgggaaatggaagaaaaaatggat
gaccttacaaaacaactttttgctgatctggaaaaagaggaaaggcaaagaaaaatactt
gagaccaacttccagaatcagaagaaagactatgagaaacagattgaagcactacatgaa
gaaattagatgtctgagagaagaaaatattcgactgcagcaacagagtcaagatgacttt
caaatgaatgaaaatctaaagcaagagatagagcaacttaagaagcaagcaaaggaaatc
ccaggtcttaagaaagaaattttacttcttgaagcacagaagattgatacagaaaaacaa
attcaaacacaagtgaaggacatgcgagaaaaaatgtcagaagttacaaaacagcttctt
ggaagtttggaaatagaaggactacaaaacaggttgtcccaagaggatctggagcagatg
aatgaggatggagaactctggtttgcatatgatggtctgaagaaggctactagggtcctg
gagtgccattttcaagctcagaaggaaagctacgagaaagaaatagagactttaaacttt
aaaattgaacacctaaatcaagaaactaaccatctgcaaaagctcttcagagaagaaaat
agtgttaatgataatattcgacaagaagtgaccaggctaagtgctgaaaacatgattatc
ccagagcttaaacaacaggtctcagagctaaagagacaaaaactggatctggaaaacagc
cttaaggaacaggctagtgaaatgaaagagaaaatggaaaaagtttctattcagttacat
catgaccttgaagaagaaggatcacaaaggagaagtctagagctccagagacaaaattac
gaaaaagaaaaggaagaattagttgcaaaacttgaagaaattcaggaaaagaataaccaa
ctaaagaaagaattcaagtcagaaagtgaagcaaaaggcaagataaggcaagagatatct
cgactgactgcagaaaacatggatcttgaagaacaaattgacatgaagaacaaatcaata
agaaagttacaagatcagattcaagcactgaccaagacaattgaaaaagagagtaaagca
ggagctccacctccacctaaggaatatattggaatgctggaatacaaaagtgaagatgag
gcaaaactcataaaacatctagttttagacttaaaaccgagaggtgtggtagtaaatatg
tttccaggccttcctgcacacattatgtttatgtgtgtgagatatgcagatcacttgaat
gatgctgacaggttgaaatccctgatgaattcaatcattaatggaatcaaagaagccagt
cagaatcatgcaggtgattttgagatgttatcattttggctgtctaacatctatcatttc
cttaactgtttaagacagtatagtggagaagaggaattcatgaaacataacacttcacgt
cagaataacaactgcctcaagaactttgacttgtctgagcacaggcagattcttagtgat
ctggccattcgtatttatcaacaattcatcacagttatggagaacaacattcagtcaatg
atagtaccaggcatgcttgaacatgaaagtcttcaaggcatttctagtatgaaacctaca
ggtcttcgcaaacgttcttctagtatcaaagaggacccagattcatataccataaccaca
ctcctgcagcagctgagttactattacaacacaatgtgtcagcatggcatggatccagag
cttattaaacaggcagtcaggcaactcttcttcttgattggagccgtcaccctcaataac
ctctttctaagaaaagacatgtgttcttgcagaaaaggaatgcagatcagatgtaatatt
agttacttggaagagtggttaaaagaaaagaatttacaaaacagcagtgccaaggaaacc
atggagcctttgtcacaggttgcctggttacttcaggttaataagaccacagatgatgat
gccaaagaaatttgtgacagatgctcaagcctttctgctgtgcagatagtaaagattctc
aactcatatacgccaatagatgattttgaaaaacgagtagcaccatcatttgtacgaaaa
gttcagtccatgctacataaccgtgaagatatgccacagctagtattggacaccaaatat
cagtttcaagtgacctttcccttcactccctcttcacaagcactggaaacaatccaggtt
cccagcagtcttaagcttggctttctaattagagtataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (96)   
   KEGG ORTHOLOGY (1)   
   RefGene (91)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (120)   

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