KEGG   Latimeria chalumnae (coelacanth): 102363933
Entry
102363933         CDS       T02913                                 
Symbol
HTT
Name
(RefSeq) huntingtin
  KO
K04533  huntingtin
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcm03019]
    102363933 (HTT)
   04131 Membrane trafficking [BR:lcm04131]
    102363933 (HTT)
   03029 Mitochondrial biogenesis [BR:lcm03029]
    102363933 (HTT)
Messenger RNA biogenesis [BR:lcm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102363933 (HTT)
Membrane trafficking [BR:lcm04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    102363933 (HTT)
Mitochondrial biogenesis [BR:lcm03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    102363933 (HTT)
SSDB
Motif
Pfam: Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT
Other DBs
NCBI-GeneID: 102363933
NCBI-ProteinID: XP_014345242
Ensembl: ENSLACG00000005863
Position
Un
AA seq 3073 aa
MATMEKLMKAFESLKSFQQQQGPAIAEEPAQKQKKDPTTTKKDRLTHCLTICENIVVQSL
RNSPEFQKLLGIAMELFLLCSDDSESDVRMVADECLNKVVKALMDSNLPRLQLELYKEIK
KNGAPRLFNTRPYLVNLLPCLTRISKRPEEAVQETLAAAIPKIMAALGNFANDSEIKVLL
KAFVANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYTWLLNVLLGLLVPVEDDRPNPLVL
GVLLTLRYLMPLLQQQVKDTSLKGSFGVTRKETEISPSPMQLIQVYELTLHYTQHRDHNV
VTAALELLQQLFRTPPPDLLHALTTSGTMRSISITKSEADSRNRSGSILELIAGGGSSCS
PVLLRKQKGKVLSGEEEALEDESETRSDVTTTTFTASVNSEAASDVPSSSGASTGGSVSP
VPESVGHDIITEQPRSQHNLQSTDSVDLSGSDLTSTATDGDDDEMLSRSSSQISTVQSDA
APDINGKITQDSSPTSDSSQTTTEGPDSAVTPSDSSELVLDGTESQYSGMQIGQLQDEEE
ETTNIVAEEFVETFKNSALAMNKPHLLQTMGHSRQSSDSSVDRFISKDEGAEIGDLESKP
SKIKGDIGHYTDDDAAPLIHCVRLLSASFLLTGQKNGLIQDKEVRVSVKALAVSCVGAAT
ALHPEAFFNKLYKIPWESTDKPEEQYVSDVLKYIEHGDPQIRGATAILCGTIIHSILSKS
RFNVESWMSSVKSSTENTITLVDFIPLLQKTLKDESSVTCKLACAAVRHCITSLCSSSYS
ELGLQLLIDLLTLRNNSYWLVRTELLETLAEMDFRLVSFLERQAENLHRGDHHYTGLLKL
QERVLSDVVIFLLGDEDPRVRHVAATVLVRLVPRLFYDCDQGQADPVIAVAREQSSVYLQ
LLMHETQPASHITVSTITRTYRGYNILQNIPDVTVENSLSRVITAVSHALTSSTSRALTL
GCVEALCLLSTIFPVCSWSVGWHCGYIASGSQASRVHLYKNRGRSFSMSQSNPTDESRKS
CVVGMANMIQSLLSSAWFPLDLSSHQDALILAGNLLSAAAPKCLKNPWTAEDDVNTSTNK
PEEPWPALGDRTLVSMVEQLFSHLLKVINICAHIIDDVAPGPTLKATLPSLANPPSLSPI
RRKGKEREPVEQTAAPMSPKKNSETNPVARPAESVGAAPTSKSTSLGGFYHLPSYLKLYD
VLKATHANYKVTLDLQNSNEKFGSFLRSALDVLSQLLELATLHDIGKCVEEILGYLKSCF
SREATMATVCVQQLLKTLFGTNLASQYDGFSSNPSRSLGKAQRLGSSSLRPGLYHYCFMA
PYTHFTQALADASLRNMVQAEHEQDTSGWFDVLQKVSSQLKSGIVNVTKHRADKNAIHNH
IRLFEPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEY
IEVGQFRESEAIIPSIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPA
LQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENED
KWKRLSRQIADVILPMLAKQQMHLDSHEALGVLNSLFETVAPSSLRPVDMLLRSMFVIPS
TLALVGTVQLWISGILAILRVLISQSTEDIVLSRIQELSLSPNLILCQNINRLKEGGECV
PPVEEQNGETQVKYLPEETLARFLLQLVGILLEEVATKQIKVDMSEQQHTFYCQQLGTLL
MCVIHIFKSGMFRRITAAATKLFKGDGADGSFYTLENLNSLVQSMIPTYPSLVLLWCQIL
LLINYTNYTWWSEVHQTPRRHSLSSTKLLSPQISGDSDESESKSKLGMCNREIVRRGALI
LFCDYVCQNLHDSEHLTWLIVNHVQDLIGLSHEPPVQDFISAVHRNSAASGLFIQAIQSR
CENLTTPTMLKKTLQCLEGIHLSQSGAVLMLYVDKLICTPFRVLARMVDTLVCRRVEMLL
AETFQNSIAQLPVEELDRIQQYLHSNGLAQRHQRLYSLLDRFRAMIAEDTVSPSPLVSSH
PLDGEKPLESIIVDKEFYLSLVQSQCCCRADSALLECTKLLNKLPQPELYSIMTTKEFNL
SLLAPCLSFGLHSMSGEQGSALFETACKVTLDHVTHSLQHLPGSHQVFQPLKPMGNVSYW
NKLSDLFGDGLYYQTIVTLCRALAQYLTSLSKQPADVHIPVDKEADITRFIVLSLEALSW
HLMNDQVPLSVDLQAALDCCCLALQQPGIWSLLASAAYVTQACTVIICIKFIVEAGTYVA
WEPEYITIACEVMAEMVESLQSVLCFGHRRNNSIPAFLTPILRNITISLARLPLVNSYTR
LPPLVWKLGWSPRAGGDFGTSLPEIPVEFLQEKDIFREFIYRINTLGWTNRTQFEETWAT
LLGVLVTQPIVMDQEEERPLEEDTERTQINVLAVQAITSLVLSAMTLPVAGNPAVSCLEQ
QPRNKTLKALDTRFGRKLSVIRGIVEREIQAMVSKRENIATHYPYQAWDPVPSLSPATSG
NLVSHEKLLLQINMEREMGSMEYKLGQVSIHSVWLGNSITPLREEEWDEDEEDESDVPAP
SSPQTSPINSRKHRAGVDIHSCSQFLLELYSQWILPSNPGKKSPAILISEVVRSLLAVSD
LFTERNQFEMMYTTLTELQKFHPSEDEILNQYLVPAICKAAAVLGMDKAIAEPVSRLLET
TLRSTHMPSRIGALHGILYVLECDLLDDTAKQLIPIISDYLVSNLRGIAHCVNVHNQQHV
LVMCAAAFYLIENYPLDVGPEFTAGIIQMCGVMVSGSEESTPSIIYHCVLRGLERLLLSE
QLSRLDGEALVKLSVDRLNMHSPHRAMAALGLMLTCMYTGKEKSSPGRISNADPTAPDSE
SVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYP
QFMANVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSPWV
SALLPHVISRMGKSEQVDVNLFCLVAIDFYRHQIDEELDRRSFQSVFEIVASPGTPYHRL
LTCLQSLHQITQL
NT seq 9222 nt   +upstreamnt  +downstreamnt
atggctaccatggagaaactgatgaaggcctttgagtccctcaagtcattccagcagcag
caggggccagctatcgccgaggagcccgcacagaaacagaaaaaagaccctacaaccacc
aagaaagacaggttgactcactgtttgacaatatgtgaaaatatagttgtacagtccctc
aggaactccccagaatttcagaaactcttgggaattgccatggaattgttcctcttgtgc
agcgatgactcagaatctgatgttaggatggtagctgatgaatgccttaataaagttgtt
aaagctttaatggactccaaccttccaaggctacaactggaattatataaagagattaag
aagaatggtgctcctcgattattcaataccaggccctatcttgtaaatctgctcccctgt
ctgactcgaataagcaaacgacctgaggaagctgtgcaggagacactggctgcagcaata
ccaaagatcatggctgctttgggtaactttgcaaatgacagtgagataaaggttttgctg
aaggcttttgttgcaaatcttaaatccagctccccaacgattcgtagaacagcagccggt
tcagctgtcagcatctgccagcactcgcgaagaacacagtatttctacacgtggttgttg
aatgttcttttaggtttgctggtccctgtggaagatgaccgtcccaatcctctggtcctt
ggagtgttactcacgctaagatatttaatgcctttactgcagcaacaggtgaaagatact
agcttgaaaggcagttttggggtaactcgaaaagaaactgaaatctcaccttccccaatg
cagctcatacaggtgtatgagttgacactacactacacccagcacagagatcataatgtg
gtgacagcagccttggagttgttgcaacagcttttccgaacacctccacctgatctcctc
catgccctgactacttctggcacaatgaggtcaatcagtatcaccaagagtgaggcagac
agcaggaatcgtagtgggagcatattggaacttatagctggaggggggtcttcatgcagc
cctgttcttctcagaaagcaaaaaggcaaagtactttctggggaagaggaggctttggag
gatgagtctgaaactagatctgatgttaccactactactttcacagcttctgttaacagt
gaagcagctagtgatgtcccctcttcctctggtgcctccactggtgggtcagttagtcca
gttcctgaatctgtaggacatgacatcatcacagaacaaccccgttcacagcataattta
caatctacagactctgtggacctgagtggttctgacttgaccagtacggctactgatgga
gatgatgatgaaatgctaagtcggagctccagccaaatcagtactgtccagtctgatgct
gcccctgacataaatggcaagatcacccaggattcctcgccaaccagtgatagctcacag
accaccactgagggtcccgattcagcagtgaccccatcggacagttctgaacttgtacta
gatggtacagaaagccagtattctggaatgcagattggccagcttcaggatgaggaggaa
gaaaccacaaacattgttgcagaggagtttgtagaaaccttcaaaaattcagctttagca
atgaataaaccccacttactgcagaccatgggccacagtcggcagtcttctgatagcagt
gtagaccggtttatatcaaaggatgaaggtgcagagattggagaccttgaaagtaagccc
tcaaaaataaagggcgatattgggcactacacagatgatgatgcagcccctctgattcac
tgtgtgcggcttctctctgcttcatttctgctaacgggacagaagaatggtcttattcaa
gacaaggaagtgagggtcagtgtcaaggcactggcagtgagttgtgttggagcagctact
gcacttcatccagaagctttcttcaacaaactttataaaataccctgggaatccacagac
aaaccagaggagcagtatgtttcagatgtcttaaaatatattgaacatggagacccacag
atcaggggagccactgccattctctgtggaaccatcatccattccatcctcagtaaatct
cgctttaacgtggaaagctggatgagtagtgtcaaaagttctacagaaaatactatcact
ttggtagactttatacctttgctgcagaaaaccctgaaagatgaatcttcagttacatgt
aaactggcctgcgcagctgttcggcactgcatcacaagtttgtgcagtagtagttacagt
gagctaggattacaactactcattgatctcctgaccctaaggaacaactcgtattggctt
gtcaggactgaactgttggaaactctagcagagatggatttcagattggtcagctttcta
gagagacaagctgagaacttacatagaggagatcaccactacacagggctgttaaaactt
caggagcgggtactcagtgatgttgtcattttcctgcttggagatgaggatcccagggtg
cggcatgtggcagcgactgtattagtgaggcttgttccacggctgttctatgattgtgac
caaggccaggcagatccagtgatagcagttgcaagagaacagagcagtgtctacctacag
cttctcatgcatgagacacaaccagcatctcatatcacagtcagcaccatcacaagaacg
tacagaggttacaacattttacagaacataccagatgtgactgtagaaaacagtctttca
agggttatcactgctgtgtctcatgcactgacatcatcaacttctcgtgcactgacactt
ggatgcgttgaagccctttgtcttctttcaacaatattcccagtttgcagctggagcgta
ggatggcattgtgggtatattgcatctggctctcaagcgtccagagtccatctttacaaa
aacagagggcgttccttcagtatgtcacaatccaaccctacagatgaatctcgaaagagc
tgtgttgttggcatggccaatatgattcagtctttgttgtcatctgcctggtttccatta
gatctttcttcacaccaagatgctctgatattggctggaaacttgctttcagctgctgct
ccaaagtgtctcaagaatccctggacagcagaggatgatgttaatacgagtactaataaa
ccagaagagccatggccagctttgggggataggactctcgttagcatggtggagcagctc
ttctcccatctgttgaaagtcattaatatctgtgctcacataatcgatgatgttgctcct
ggtcccacattaaaggcaaccttgccctctttagctaaccccccatctctaagcccaatc
aggagaaagggcaaagagagagaaccagttgaacagacagctgcaccaatgagccccaaa
aagaacagtgaaacaaatccagttgctaggccagcagaatctgttggagctgctccaacc
agcaaatcaacttctcttggtggtttttaccatcttccttcatatctcaagctgtatgat
gttttgaaggctacccatgccaactataaggtaacattagatcttcagaatagtaatgag
aagttcgggagtttcctccgttcagctttggatgtcctctcacagttgttggagcttgca
actcttcatgatatcggaaagtgtgtggaggaaatcctggggtatttgaaatcttgtttc
agtagagaggccacgatggccactgtctgtgtccagcagttgctcaagacactctttggg
acaaatttagcatcacaatatgatggattttcttccaaccccagtagatcactgggaaag
gctcagcgcttaggctcttccagcttgaggcctggactctatcactattgctttatggca
ccttacacacacttcacgcaagctttagctgatgccagccttagaaacatggtacaagct
gagcatgaacaggacacttcagggtggttcgatgtactgcaaaaagtgtcctcgcagctg
aagtctggcattgtcaatgtaactaaacatcgagcagataagaatgccattcacaaccac
attcgcttgtttgagccactagttattaaggcattaaagcagtacacgactacaacttca
gtacagctgcagaggcaggttttagatctgctggcacaactagtacagctgagggttaat
tactgcctcctggactctgatcaggtctttattgggtttgttctcaagcagtttgaatat
attgaggtgggccaattcagggaatctgaagctatcattcccagcatcttttttttcctg
gtattgctgtcctatgagcgttaccactctaagcagatcattggaattcctaaaattatc
cagctttgtgatggcatcatggccagtggccgaaaagcagtaacccatgcaattccagct
ctgcagcccatagtgcatgacttgtttgtgttgcgggggagtaacaaagctgatgcaggc
aaagagttggaaactcaaaaggaagtggtggtatccatgctgctgagactcatccagtac
catcaagtacttgagatgttcattctagtactgcaacagtgtcacaaggaaaatgaagac
aaatggaaaagactgtcacgccagatagctgatgtaatcctcccaatgctagcaaaacag
cagatgcacttggattcccatgaagctttgggggttctgaacagtctatttgaaactgtt
gcaccatcatcactacgtcccgtggatatgcttctgagaagcatgtttgttatacctagc
acgctggccttggtagggactgttcagctgtggatttcaggaatcttggctatcctgcgg
gttctcatttcccagtcaaccgaggatattgttttgtctcggatccaggagctctcccta
tccccgaatctgatcttgtgtcagaacattaataggctcaaggaggggggtgagtgtgtc
cctcctgtagaagagcagaatggagaaacgcaggtgaaatatctacctgaggaaacattg
gcaaggtttttattgcagctggtggggattctgctggaagaagttgctactaagcaaatt
aaggtggatatgagtgagcagcaacacacattctactgccagcagttaggcacactgctt
atgtgtgtcatacacatcttcaaatcaggaatgttccggagaatcacggcagctgccacg
aagttgtttaaaggagatggcgctgacggaagtttctataccttagaaaatctgaattcc
ttggttcagtccatgattcccacctacccctcactggtgctgctctggtgtcagatcctg
ctgcttatcaactacaccaactacacctggtggtcagaggtgcaccaaacacccagaaga
cacagtctatccagtaccaaattgcttagccctcaaatatctggagacagtgatgagtct
gaatcaaaatctaaactgggcatgtgcaatagagaaatcgttcgaaggggagcacttatt
ctcttctgtgattatgtttgtcaaaacctgcatgattcagagcacttgacttggcttata
gttaatcatgttcaggaccttattggtttgtctcatgaacctcctgtgcaagattttatc
agtgcagttcacagaaactctgctgccagtggtctttttatccaagccattcagtctcga
tgtgaaaacctgactacaccaacaatgctgaagaagaccttacagtgtctggaaggaatt
catcttagccagtctggtgctgtgctaatgttgtatgtagataagcttatttgtactcca
ttccgtgtgctggctcgtatggtggacacgcttgtttgtcggcgagtagagatgctgctg
gctgagacgttccagaacagcattgctcagttaccagttgaagaactagaccgaatacaa
caataccttcacagtaatggattagctcaaagacatcaaagactgtattccctgctggac
aggttccgggctatgatcgcagaagacactgttagcccttcacccctggtttcatcacac
ccactggatggagagaaaccactagaatccataattgttgacaaagaattctacttgtca
ctagtgcaatctcagtgctgttgccgggcagattctgcactactggaatgcaccaagtta
ttgaacaagcttcctcagcctgaactctactctatcatgacaacaaaggagttcaacctg
agcttgttagctccctgtttgagtttcggtcttcatagtatgtctggagaacagggcagt
gccttgtttgaaactgcttgtaaagtgactttagatcatgtcacgcacagtttgcagcat
cttcctggcagtcatcaggtgtttcagccattgaagcccatgggtaacgtttcatactgg
aacaagctgagtgatctatttggagatggtctgtattaccaaaccattgtcactctctgc
cgtgccctggctcagtatctcacttccctctccaaacaaccagcagatgttcacattcca
gttgataaagaagctgacatcactagatttattgtgctgtcactggaggcactgtcatgg
cacttgatgaatgatcaggttcccctgagtgtagatttacaggctgcattggactgctgc
tgtctggccctgcagcagcctgggatctggagcctgttggcttcagcagcgtatgtcacg
caagcttgtactgtcattatctgcataaaatttatcgtggaagctggtacgtatgtggca
tgggaacccgagtacattacaatagcgtgtgaagtgatggctgaaatggtggagagtcta
cagtctgtcttgtgttttggccacagaaggaacaatagtatcccggcgttccttactcct
atccttagaaatattaccattagcctagctaggctgcctcttgttaacagctacacgaga
ttgcctccattggtctggaaattgggctggtccccaagagctggaggtgattttggtact
tcattgcctgaaatccctgtggagttccttcaagagaaggacatattccgagagttcatc
taccgcattaacactttgggatggacaaaccgcactcagtttgaggagacctgggcaaca
cttttgggggtacttgtaacccagcctatagtaatggaccaagaagaagaacgtccacta
gaggaagatacagagaggacccagattaacgtccttgcagtccaagcaataacatcttta
gtgctaagcgcaatgacgctacctgttgcagggaatccagctgttagctgtctggaacag
caaccacggaacaaaactttaaaagctctggacacaaggtttggaaggaagctgagcgtt
atcagaggaattgtagaacgggaaatccaagctatggtatccaaaagagagaacattgca
actcactatccatatcaggcttgggaccctgttccttctctctcacctgctacatcaggc
aatcttgtctcccatgaaaagctgcttctgcagattaatatggaaagagagatgggcagt
atggaatataaactgggacaggtatctattcactcagtatggcttggtaacagcatcaca
ccattgagagaagaggaatgggatgaagatgaggaagatgagagtgatgtccctgctcct
tcttcacctcagacctccccaataaactccagaaaacatcgtgctggggttgatatacac
tcttgttcccagttcttgttggaactctacagtcagtggatattaccgtccaaccctggc
aagaagtctccagccatcttgattagtgaagtggtgcgatcacttctggcagtgtcagat
ctttttactgagcgaaatcagtttgaaatgatgtatacaacactgacagaattacagaaa
ttccacccatctgaagatgagattcttaaccaatacctggtgccagcaatttgtaaggca
gctgcagtccttggaatggataaggctatagcagagcctgtaagccgtttgttggagaca
accctacgcagtacccacatgccgagccggattggagccctgcatggaattctctacgtc
cttgagtgtgacttactggatgatacagcaaaacagctcattccaattattagtgattat
ctagtatccaacctcagaggaattgcacactgtgtgaatgtccacaaccagcaacatgta
ttagtgatgtgtgcagcagctttttatttgatcgagaactacccattggatgtaggccca
gaattcactgctggaattatccagatgtgtggagtgatggtttctgggagtgaagaatca
accccatcaatcatctaccactgcgtcttacgagggttagaacgccttctcctgtctgag
cagctgtccaggctggatggagaggcactagtgaaactgagtgttgacagactcaacatg
catagtcctcatagagccatggcagcactgggattgatgctgacttgcatgtatacaggt
aaagagaaaagtagccctggacgaatatcaaacgctgatcccacagctccagacagtgag
tctgttattgtggcaatggaacgggtgtcggttctttttgacaggattaggaagggcttt
ccttgtgaggcacgagtagtggcacggattctcccacagtttttagatgacttcttccca
ccgcaggatgtgatgaacaaggttattggagaatttctgtccaatcagcagccatatcca
cagttcatggcaaatgttgtttacaaggtatttcagactttgcatactaccgggcagtcc
tctatggttcgagattgggttatgctatcactctccaattttactcagaggacaccggtc
gccatggcaatgtggagtctttcctgtttctttgtcagtgcttctaccagcccatgggtt
tcagctctccttcctcacgttatcagcagaatgggaaaatcggaacaggtggatgtcaac
cttttctgcttggtagccattgatttctacagacatcagattgatgaggagctggaccgc
cgatccttccagtctgtttttgagattgtggcatctccaggaactccctatcaccgatta
ctaacatgtttacaaagtctccaccagatcacacagctctga

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Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (77)   

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