KEGG   Larimichthys crocea (large yellow croaker): 104919552
Entry
104919552         CDS       T04659                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104919552 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lco03021]
    104919552 (taf12)
   03036 Chromosome and associated proteins [BR:lco03036]
    104919552 (taf12)
Transcription machinery [BR:lco03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104919552 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     104919552 (taf12)
Chromosome and associated proteins [BR:lco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     104919552 (taf12)
    STAGA complex
     104919552 (taf12)
    TFTC complex
     104919552 (taf12)
    SAGA complex
     104919552 (taf12)
    SLIK complex
     104919552 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C Tic110
Other DBs
NCBI-GeneID: 104919552
NCBI-ProteinID: XP_019122775
Position
XIII:30222116..30226381
AA seq 131 aa
MANSTTTAVKALTPGPPGRSSPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADD
FIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPFKKACTTEAHKQ
RMALIRKTTKK
NT seq 396 nt   +upstreamnt  +downstreamnt
atggctaacagcaccacgacagcagtgaaggccctgacaccaggccctcctggcagaagt
agtccagagggatctcaggtgcttagtaagaagaaactacaggacctggtgagagagatt
gatccgaatgagcagctggatgaggacgttgaggagatgctgctacaaattgcagatgac
tttatagagagtgtagtgacagcggcctgtcaactggcacgtcatcgtaagtccaacacc
ttggaggtgaaggatgttcaattacatcttgagcgtcagtggaacatgtggattcctggt
tatggctcagatgagatccggccgttcaagaaggcgtgcaccacagaggctcacaaacag
agaatggcgctgatccgcaagacaaccaaaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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