KEGG   Larimichthys crocea (large yellow croaker): 104921222
Entry
104921222         CDS       T04659                                 
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04137  Mitophagy - animal
lco04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104921222 (vcp)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    104921222 (vcp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104921222 (vcp)
   03009 Ribosome biogenesis [BR:lco03009]
    104921222 (vcp)
   04131 Membrane trafficking [BR:lco04131]
    104921222 (vcp)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lco04147]
    104921222 (vcp)
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     104921222 (vcp)
Ribosome biogenesis [BR:lco03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    104921222 (vcp)
Membrane trafficking [BR:lco04131]
 SNARE
  SNARE associated proteins
   Others
    104921222 (vcp)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    104921222 (vcp)
Exosome [BR:lco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104921222 (vcp)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 AAA_22 TIP49 AAA_14 Vps4_C RNA_helicase AAA_28 Parvo_NS1 AAA_18 Mg_chelatase nSTAND3 AAA_17 IstB_IS21 ATPase_2 AAA_7 ATPase DUF815 ABC_tran Bac_DnaA AAA_24 NB-ARC TsaE Zeta_toxin NACHT ResIII SLFN-g3_helicase Viral_helicase1 bpMoxR UFD1 KAP_NTPase
Other DBs
NCBI-GeneID: 104921222
NCBI-ProteinID: NP_001290278
UniProt: B8XQT3
Position
III:complement(27850406..27859253)
AA seq 806 aa
MASGGEARNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRGEDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMGKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVGLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSHGSGGAGTGPVFNEDNDDDLYG
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcctcgggaggggaagcgagaaatgatgacctagccactgcaattctgaaacagaag
aacagacccaacagactgatcgttgatgaatccatcaatgaagacaacagtgtggtctct
ctctctcagaccaagatggacgagctgcagctcttccgtggagacacagtgctgatgaaa
ggaaagaagaggcgggagactgtgtgcatcgtgctgtccgacgacacttgttccgatgaa
aaagttcgcatgaacagggtggtccgcaacaatctgagggtccggctgggtgatgtcatc
agcattcagccatgtcctgatgtgaagtacggaaagaggatccacgtcctcccaatagat
gacacagtagagggaattactggcaacctgtttgaggtctacctgaagccatactttctg
gaggcttacaggccaatccgcaaaggtgatattttcctggtcagaggaggcatgcgtgct
gtggaattcaaggtggtagagaccgacccctctccatactgcatcgttgctcctgacaca
gtcatccactgtgagggagagccaatcaggggagaggatgaggaagagtccctgaacgag
gtgggctatgatgacattggaggagtgaggaagcagctagctcagatcaaagagatggtg
gagctgcctcttagacaccccgcactgttcaaggccatcggagtcaagcccccacgtgga
atcctgctgtacggaccccctggaactggaaagactttgattgccagagctgtagccaat
gaaactggagctttcttcttcctgattaacggtcctgagatcatgggtaagctggcagga
gagagcgagagtaacctgagaaaggccttcgaggaagcagagaagaatgctcctgccatc
atctttatcgatgagcttgacgcaatcgctcctaaaagagagaagacccatggagaggtg
gagaggcgcattgtttctcagctgctgactcttatggacggcctgaaacagagagctcac
gtcatcgtcatggctgccaccaacagacccaacagcattgacccagctctcaggagattt
gggcgttttgatcgggaagtggacatcggcatcccagatgccactggcagactggagatt
ctccagattcacaccaagaacatgaaactggctgacgatgttgacttggaacaggtagcc
aatgagacccatggacacgttggtgcagatctggctgctctctgctctgaggctgccctg
caggccatcaggaagaagatggacctgatcgaccttgaggacgagaccattgatgctgaa
gtcatgaactcacttgccgtcactatggatgacttcaagtgggccctgagccagagcaac
ccatctgcactgagggagacggtggttgaggttcccaacatcacctgggaggacatcgga
ggtctggatgatgtcaagagggagctgcaagagttggtgcagtatccagtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctgttctatggtccccct
ggttgtggtaagacactgctggccaaagccattgccaatgagtgccaggcaaatttcatc
tccatcaaaggacccgagctgctcaccatgtggtttggagagtctgaggccaacgtcaga
gagatctttgacaaggctcgtcaagcagccccatgcgttctcttctttgatgagctcgac
tccatagccaaggcccgtggtggcaacgtgggagatggcggcggagcagctgaccgtgtc
atcaaccagatcctgaccgagatggatggaatgtccagcaagaagaacgtcttcatcatc
ggagccacaaacagaccagacatcatcgaccctgccatcctgagacctggccgtctggat
cagctcatctacatccccctgcccgacgagaagagcaggatgagcatcctgaaagccaac
ctccgcaagagccccatcagcaaggatgtgggcttggacttcctggcaaagatgaccaat
ggcttttccggagcagatcttacagagatctgccagcgggcgtgtaagctggccatcaga
gagagcatcgagaatgagatccgcagagagagggagaggcagaccaacccatcagccatg
gaggtggaagaggatgatcccgtgcccgagataagaaaggaccactttgaagaagcaatg
cgatttgctcgtcgctccgtcagtgacaacgacattcgcaaatacgagatgtttgcccag
acactgcagcagagccgtggctttggcagcttcaggtttccctccagtgctgcaggcggc
agtggtccaagccatggctcaggaggagctggcactggtccagtgttcaatgaagacaac
gacgatgacctttatggataa

DBGET integrated database retrieval system