KEGG   Larimichthys crocea (large yellow croaker): 104926906
Entry
104926906         CDS       T04659                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lco03019]
    104926906 (patl2)
Messenger RNA biogenesis [BR:lco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104926906 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 104926906
NCBI-ProteinID: XP_019125868
Position
XVI:7887968..7895768
AA seq 717 aa
MSDSEEQQQEAEKLSQPQWPENGEDWSDGEDGTNMDCGLLQAMAEEDEEINVYNEETFGM
DLDTHGTTEDPSSGLLQFGEPPLSPPTPLPPPPPDPKPPSHHSSPSPPRHKPQYVPRALP
GQRGRGRGQRGGLGRGQMFEDPAVMRIVQGRPSLKGLDSAIVDCGNTMNRNTFEDDYMSP
SSRKTRRISGSILQDSAIVCVIDGHRGQHLTSNFLDLPYPVSSFRGRRGDSRGAYPRRQF
GHRGPSQMHVPMMPGSPVLSRQPLTPRQHYNQTGGFMFPPNRPCPSTPQSLTPKMMQLRF
GANSPRPSPFYSPSSNSVQHIRYPGPVTQLHPQHKRLLTQKQRIYQRKPEGWDPYCNLMT
PKEKEWITRLQMIQLQSEHPYLEDYYYQEYYRRIEAKMAEEELGIRGKREPPKLTTPYIM
KTDSYTPVVHIEGSLGQVAVSTCYSPRRAISAVHAVQAHGPLEEQKDIRQQRLEILSKIE
KLFIVLLEVEETERMKTTVLSEAEQRRLMEKTQRKVEHIYSQLQHHNPLDSGGEFLPFML
VSKGKRLVARLLPFLKHDTALKILRIVTSNLPTLMSRDTEEALPVLYPPLRNVIGGLTFS
QLIRVLKDLTAESLTTYESLTLACQNKFGLSLLYALLSQGEKLLSSGVPLEPSIGDFETW
TDIIFQVAGQLSQCSLVEPLLLPSNLLTLFCRYLDKRTVHQLKSNMESATGFLALPS
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgagtgattcagaagaacagcaacaagaggctgaaaagttgtctcagcctcagtggccc
gagaatggagaggattggagtgatggagaggatgggaccaatatggactgtgggctcctg
caggccatggctgaggaggatgaggagatcaacgtctacaatgaggagacgtttggcatg
gatcttgacacacacggcaccacagaggaccccagcagcggcctccttcagttcggagag
ccgcctctatcaccaccaacaccactcccgccaccgccaccagatcccaaaccaccgtcc
caccacagctccccatcccctcccaggcacaaaccacagtatgtgcctcgggctctgccg
gggcagcgtggcagaggtaggggacagagaggagggctgggcaggggacaaatgtttgaa
gacccagctgtgatgaggatagtgcaggggcgaccaagtctgaagggtcttgacagcgcc
atagtggactgtgggaataccatgaatcgaaatacctttgaagatgattatatgtcaccg
tcttccagaaagaccagaagaatctcaggatcaatacttcaggacagtgctatagtgtgt
gtgattgatggtcacagaggtcagcacctgacctccaacttcctggatttgccatatcct
gtctcttccttcaggggcaggagaggggactccagaggagcgtaccccagaagacagttt
ggccacagaggcccctctcagatgcatgtacccatgatgccaggatcaccagtcctctca
cgtcaaccgttaacccctcggcaacattacaatcagactgggggcttcatgtttcctccg
aatcggccttgcccctccactcctcagtctctgactcctaagatgatgcaacttcgcttt
ggtgccaactcaccaagaccgtcccccttttacagcccctcatctaattcagtgcaacat
atcaggtaccccggccctgtcacccagctccacccccaacataaacgactacttactcaa
aaacaacgtatataccaaagaaaaccagagggctgggatccttactgtaatctcatgacc
cccaaagagaaggagtggatcaccaggctgcagatgattcagctgcaaagtgagcatcca
taccttgaggactactattaccaggagtactataggcgaatagaagctaagatggcagag
gaagaactgggcatcaggggcaagagggagccaccaaaactcaccacaccttacatcatg
aaaactgactcctacactccagtggtgcacattgaaggctcgttgggtcaagttgctgtg
tccacatgttactctccacgtcgtgccatcagtgctgttcatgcggttcaagctcacggt
ccactcgaggaacaaaaagacatcagacagcagcggttagagatcctcagcaaaattgaa
aagttgttcatagttctgttggaggtcgaggagacggagaggatgaaaaccacagtcttg
tctgaagcagaacaaagaaggttgatggagaagacacagaggaaggtggagcacatctac
tcccagctgcaacaccacaatcccctagattcaggaggggagtttcttcctttcatgctc
gtctcaaaaggcaaaaggctagtcgcccgtctgctcccattccttaaacacgatactgca
ctgaaaatcttgagaattgtgacttctaatctacctacgctaatgagcagagataccgaa
gaggcccttccagtgctttacccacctcttcgaaatgtgattggaggcctgacgttcagc
caactcatcagagtcctcaaagatctgactgcagagtctctgacgacatacgagtcgctc
acgctggcatgtcagaacaagtttggactgtccttactatatgctctcctgtcccaagga
gagaagctgttgtcctcaggtgtccctctagagcccagcatcggtgactttgagacctgg
actgacataatattccaggtggcagggcagctgtcccagtgttcgctggtggagccgctt
ctcctgccctcaaacctgctcactctcttctgccgttacctggacaaacgcactgtgcat
cagctgaaaagcaacatggaatctgcaaccggattcttggctcttccatcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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