KEGG   Larimichthys crocea (large yellow croaker): 104932198
Entry
104932198         CDS       T04659                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lco04121]
    104932198
Enzymes [BR:lco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104932198
Ubiquitin system [BR:lco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104932198
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-ANAPC11 zf-RING_16
Other DBs
NCBI-GeneID: 104932198
NCBI-ProteinID: XP_010745672
Position
X:complement(38870299..38894414)
AA seq 751 aa
MPIAAAGQPTTQEPRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLGGY
SYSQSGARGFVQPGSINASPPQSPAASSSFLFHPLHSHQMAMEPPRTRSRSRSGYYQQYG
GGNGNGITGSGVMGSNHHHHHHHHQHHQQQQQQQQLHPQQQQQHGAGCAPLGAHGNHSEN
QPRPPGSNASPGIQRLSSVPGAHRIPAAGASGGSYHCHPDHAYGEESDKSEESPSPKRQR
LSSQSVLEQLTSSAPPPSTPSPPIRPWESGPPSRRQPHPHTHYHQERCLTPARHRRSPPA
RRQRGRLSRPTRHLPSHHHPSTQGPPPRLSPSELQDENYHRNPHPSTHQTYPTHTPSAYG
QPPSAGGGGSGLEEPRAFHPPTLSPRLLHPAAHHHHHHHHQQQHHATQQQQGAMVMDLHE
QLQQASVPVSYTVTPVPPHGLAAPLCSGQHLPPTCSSQQQVPACSVVFSTGQHYHPMLQA
CSVQHLPVPYAFPSLLSSDPQFLLPHPPHLSHHPPHLPSPGQFLPFQTQQPRSPLQRIEN
EVELLGEQLSVGGGFSYAHHHHHHHHQPPSTLPPSTPLQFLSHHDPLSQELFTVPYPHFM
PRRFTSRRYRSQQAVPPSPYHPSFLPYFLSMLPVPPNVAPTISLELDVDDGEVENYEALL
NLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHE
FHTKCVDKWLKANRTCPICRADASEVQRDSE
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgccaatcgcagccgctggacagccaacgactcaggagcccagagtttgcccccgactg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtcggcagagcgaacagagtacgggggcgcggaggggggcagaggactcgggggctat
agttacagccagagcggcgctaggggctttgtacagcccggatccatcaacgcttctccg
ccgcagtccccagccgcgtcctcctcttttcttttccacccccttcactcccaccaaatg
gccatggagcccccaaggactcgatcgcgttctcgctctggatattaccagcagtacggt
ggtgggaatggcaacggaattaccggcagcggagtcatgggatctaaccatcatcaccat
caccaccaccaccagcatcaccagcagcagcagcagcagcagcaactacatcctcagcag
cagcagcagcacggtgccggttgcgctccacttggagctcacggcaaccactcggagaac
cagccgcgacccccaggaagtaacgcctctcccggcattcagaggctttcttcggttccc
ggagcgcaccgcatcccggcggcaggagcctctggcgggtcctaccactgccacccagac
catgcatatggagaggagagcgataagagtgaggaaagccccagtccaaaacgccagagg
ctgtccagtcagtctgtattggaacagctaacctcatccgctcccccaccgtccacccca
tctccccccatccgaccctgggagtcaggacccccaagtcggagacaacctcacccccac
acacactaccaccaggagagatgcctcactcctgctcggcacaggcgcagcccgccagcg
aggcgtcaacgtggtcgtctctctagacccacccgtcacctgccttcccatcaccacccc
tccacccaaggccctccacctcgtctgtcgccatcagagctccaggatgagaactaccac
cgcaacccccatccctccacacaccagacatacccaacacacacacccagcgcctatggc
cagcctccttcagcgggaggcggggggtcaggtttggaggagcccagagcttttcaccct
cccaccttgtcgccacgactactgcacccggctgctcaccaccaccaccaccatcaccat
cagcaacagcatcatgcaacacaacaacagcaaggagccatggtcatggacttgcatgaa
cagctgcagcaggccagtgtaccagtgtcctacacagtgacccccgtccctccacacggt
ctcgcagcacctttgtgtagcggccagcaccttccccctacctgttcctcacaacaacaa
gtccccgcctgcagcgtggtcttcagcactggacaacactaccacccgatgctacaggca
tgttcagtgcaacatttgccggtgccctacgcctttccttctctgctgtcaagtgaccct
cagttcctgcttccccatccaccccacctctctcaccacccgccacacctcccctcaccc
ggacagttcctacctttccagacacaacaaccacgatcgcccttacagaggatcgaaaat
gaggttgagcttttgggagagcagctttcagtgggtggaggcttcagctatgcccaccat
catcaccaccatcatcaccagcctccctccaccctgccgccctccacaccactccagttc
ctctcgcaccacgaccccctgtcgcaggagctctttacagtgccctatccccactttatg
cctcgccgattcacaagccggcgttaccgctctcagcaggctgtacccccatcaccctac
cacccgagcttcctgccttacttcctgtccatgcttcctgtacccccaaatgtggccccc
actatcagcctagagctggacgtggacgacggagaggtggagaactatgaggccctgttg
aacctcgcagaacgtttaggagaggcaaagccccgcggtctaactaaagcagatatagaa
cagcttccatcatacaggttcaaccccaacaaccatcagtctgagcaaacactgtgtgtg
gtatgtatgtgtgacttcgagtctcgccagctcctcagggtcttgccctgtaatcacgag
ttccacaccaagtgtgtagacaagtggcttaaggctaaccgaacctgtcctatttgtcga
gccgatgcctctgaggtccagcgggattctgagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (104)   
   KEGG ORTHOLOGY (1)   
   RefGene (100)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (125)   

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