KEGG   Larimichthys crocea (large yellow croaker): 104935352
Entry
104935352         CDS       T04659                                 
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
  KO
K20777  exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
Organism
lco  Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:lco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104935352 (exd2)
Enzymes [BR:lco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     104935352 (exd2)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     104935352 (exd2)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RRXRR Ribosomal_S14 Cytochrom_c3_2 AC_N
Other DBs
NCBI-GeneID: 104935352
NCBI-ProteinID: XP_019133554
Position
XXIV:complement(3470919..3478306)
AA seq 641 aa
MSHRGPLTAVLTTVLGATLGGLLIWRVYRTKRKRLPSVQTAADPVEAPCPVEKELTDVAY
TCTRAPLLEKEFKAVECQTTQPPPAVQIPSSKQLLGVKPVMVSSEEEWQQLWPLMQKELA
VFPVLGFDCEWVKSDAVSVKGRASAVSLLQMATYSGLCVLVRLLAFRSGHFPLSLMEVLR
DPHILKVGVGCYEDGKRLTRDYGLSMTCTVDLRYLTLRQRLTAVNNGLSLKSLAADLLNV
SLDKSLELRCSDWEADQLTLEQMTYAARDAQVSIALFLHLLGLQSEASPASSSGSSYSEL
AARCQGLVDVPFRGRGDGEDRASDGERRRRTRKPPAQESPESGDQQVPDPRKNNKRKPLG
VGYSARKSPLYDNCFLHAPDDQPLCTCDKKKAKWYLDKGIGVLQSEDPFVVRLLFEPSGR
PDSQQDYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPTEMKDHNSHDILLLCTSCHA
ASNVHDGFLKQQLAEEFAAPQGCEEGVRLLEDSDRRRVRSAARALLTAGEGLPEQRREEL
QGLIKSFLNVDEEQELTDEELQQAASLETRIFNKAYVPHGLKVVQAQADQGLRGLMDLER
RWRQHFLTTMQPRHLPPLWSVDHNHSKFLRKYGEDLPIKLN
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgtctcaccgagggcctttaactgctgtcctaacaacagtattaggggcgaccttaggc
gggctgctcatatggcgagtgtaccggacaaaaaggaagcggctgccttccgtccagacg
gcggccgatcctgtggaagctccgtgtcccgtggagaaggagctcacagacgtggcgtat
acgtgcacccgagcaccgctcctggagaaagagtttaaggctgtggagtgtcagaccacg
cagccgccccctgctgtgcagatcccgtcgtctaaacagctgctcggggtgaaaccagtg
atggtgagctctgaagaggagtggcagcagctgtggccgctgatgcagaaggagttggca
gtcttccccgtgctggggtttgactgtgaatgggtaaagagcgacgccgtgtcggtgaaa
ggccgagcctcggcggtctccctgttacagatggccacatattcaggcctgtgtgtcctg
gtgaggctgctggcgtttcgaagcggccacttccctctcagcttaatggaagtcctccga
gacccgcacattttgaaagtcggcgtcggctgctacgaagacggcaagcggctgacgcgc
gactacggcctgtcgatgacgtgcacggtcgacctgcgctaccttactttaagacaaagg
ctgactgcggtgaataatggcctcagtctgaagtctctggcagccgatctgttgaatgtg
tctctggataaatccctggagctgcgctgcagtgactgggaggcagatcagctgacactg
gagcagatgacttacgctgcgagagatgcccaagtgtccatcgccctcttcctccatctc
ctcggcctccagtccgaagccagtcccgcctcttccagcgggagctcttactccgagttg
gccgcccgctgccagggcctggtggacgtgcctttcaggggccgaggagacggagaagac
agggcgtctgacggagagaggaggcggaggacgcggaaaccgcccgctcaagaaagcccg
gagtctggagatcagcaagtcccagaccctcgaaagaataacaagaggaaaccgctgggc
gtgggctactccgccaggaagtctcctctctatgataactgcttcctccacgctccggat
gaccagcctctgtgtacctgtgacaagaagaaagccaaatggtacctagataaaggaata
ggagtgctccagagtgaagatccttttgtagtccggctgctgtttgagccgtcgggacgt
ccggactcccaacaggactattatctgactgccaaggagaatctgtgtgtagtctgtggc
aaagcggattcctacatcaggaaaaacatcgtgccacatgagtacagacggcattttccc
accgagatgaaagaccacaactcccacgacatcctgctgctctgcaccagctgccacgct
gcctccaatgtgcacgacggcttcctgaagcagcagctggctgaagagttcgctgcccct
cagggctgcgaggagggagtccgcctgctggaggactccgaccgacggcgggtacgttcg
gcggctcgcgctctgctcactgccggcgaaggactgccggagcagcgacgagaggagctg
cagggtctgatcaagagcttcctcaacgtggacgaggagcaggagctgacggacgaggag
ctgcagcaggctgccagtttggagacgaggattttcaacaaggcgtacgtgcctcacggt
ctgaaggtggtgcaggctcaagccgatcagggcctgcggggcctgatggacctggagcgc
cgctggaggcagcacttcctcaccaccatgcagcctcgacacctccctccgctctggtcc
gtcgaccacaaccacagcaagttcctccgcaagtacggagaggacctgcccatcaaactc
aactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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