KEGG   Larimichthys crocea (large yellow croaker): 104937258
Entry
104937258         CDS       T04659                                 
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:lco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    104937258 (usp30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lco01002]
    104937258 (usp30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lco04131]
    104937258 (usp30)
   04121 Ubiquitin system [BR:lco04121]
    104937258 (usp30)
Enzymes [BR:lco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     104937258 (usp30)
Peptidases and inhibitors [BR:lco01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   104937258 (usp30)
Membrane trafficking [BR:lco04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    104937258 (usp30)
Ubiquitin system [BR:lco04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    104937258 (usp30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700 zinc_ribbon_15
Other DBs
NCBI-GeneID: 104937258
NCBI-ProteinID: XP_010751759
UniProt: A0A6G0IL37
Position
III:complement(28441015..28447246)
AA seq 505 aa
MLWYRPESSDKLIGEFLGTGRVVRNKMIKNWGLIGGIAAALAAGVYVLWGPITERKKKKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIGWLEKFSASPMVQSCKDNQLSRTLLQLLKAL
SSDEPGEEDVLDAGSLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDHQPKVTHLF
DMQSLESLPDQDEKTMTCRSRAPLHPIPSPWKFQHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLSIPLPQWGRPMSLDQCLQHFISSETIKEVECENCTKLQQVTTVNGPVLESQRTT
FVKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQFTEYLSMDRYKHNASTLRGQRVK
CAPAPIRTENSDDSTEKPTANGTEAEHRNNNNKPFSNGTCSSVFLHSPGVNPQLGLTYDF
SSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPSSTRSASLFSSQWLWVSDDSVRKASLHEV
LSSNAYMLFYERVRRPNFSLRSSEE
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgttgtggtaccgtccagaaagctcggataagctcatcggggagttccttggcaccgga
cgcgttgtcagaaacaaaatgatcaaaaactggggtcttattggcgggatagctgctgca
cttgcagccggagtttacgttttgtggggaccaatcacagagagaaagaagaagaagaga
ggtatggttcccggtctgttgaacttaggcaacacgtgcttcctgaactctttgcttcag
ggtttggcagcttgtccgtccttcattgggtggctggagaagttttcagcttcgcccatg
gtccagtcatgtaaagacaaccagctgtccaggacactgcttcagcttctcaaagctctg
tccagtgatgagcccggggaggaagacgtactcgatgccggatcccttctggatgttctc
agactgtaccggtggcatatcagttcatttgaagagcaggatgcacatgaactttttcat
gtcctcacatcttctctggaggaggagcgggaccatcaacccaaagtgactcatttgttt
gacatgcagtctctcgagagcctgcctgatcaagatgagaaaactatgacctgtaggagt
cgagcccctcttcatcctataccaagtccttggaagtttcagcatccgttccacggtcgt
ctaacaagcaacatgtcctgcaagcgctgcgaacaacaaagtccagtgcggtatgactca
tttgagagcctctccctgtccattcctttacctcagtggggtcgacctatgtctctagat
cagtgtcttcagcatttcatctcttcagaaaccatcaaagaagtggagtgtgaaaactgc
accaagcttcaacaggtgaccacagtgaacggaccagttctggaaagtcagaggacaaca
tttgttaaacagttaaaactgggaaagctccctcagtgcctctgcatccatttacaaaga
ctgacgtggtccaatgaaggaacccccatcaaaagacaagagcacgtgcagttcacagag
tatctatcgatggaccgatacaaacacaatgcttccacactgagaggtcagcgggtcaaa
tgtgcaccggctccaatcaggacagaaaattcagatgattccacagaaaagccgacagct
aacggcaccgaagcagagcatcgcaacaacaacaacaaacctttttccaatgggacctgt
tcgtctgtgtttcttcactctcctggtgtgaacccacagctcggcctcacgtatgacttc
agttctacagagtaccttttccaactcacggctgtgctggttcatcacggtgacatgcac
tcaggacatttcgtcacgtaccgccgcagcccttcctcaacccgcagcgcttcactcttc
agctctcagtggctttgggtgtcagacgactcggtacgaaaagccagcctgcacgaggtg
ctgtcttccaacgcttacatgcttttctacgagagagtcagaagaccgaacttcagtcta
cgctcgtcagaggagtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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